RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MRPL28Q13084 256 aaKnown RBP11.75□□□□□ -0.53
PTCH1-203ENST00000375274 GRIK4Q16099 956 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 ADCK2Q7Z695 626 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 STX19Q8N4C7 294 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 DYRK4Q9NR20 520 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 TAS2R13Q9NYV9 303 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 RPTORQ8N122 1335 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 SLC12A8A0AV02 714 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 PRRG1O14668 218 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 SYNCRIPO60506 623 aaKnown RBP11.75□□□□□ -0.53
PTCH1-203ENST00000375274 LTFP02788 710 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 SERPIND1P05546 499 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 SOAT1P35610 550 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 MMP14P50281 582 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 CCT8P50990 548 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 SCNN1BP51168 640 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 ACVR2BQ13705 512 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 NFE2Q16621 373 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-203ENST00000375274 UNC93AQ86WB7 457 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 HOMEZQ8IX15 550 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 SLC44A1Q8WWI5 657 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 MAGED4Q96JG8 741 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 HSFY1Q96LI6 401 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 ACTR8Q9H981 624 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 CYLDQ9NQC7 956 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 ADAM28Q9UKQ2 775 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 TNFSF13BQ9Y275 285 aa11.75□□□□□ -0.53
PTCH1-203ENST00000375274 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 PTGIRP43119 386 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 GABRB2P47870 512 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 TUBP50607 506 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 OXCT1P55809 520 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 CDH18Q13634 790 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 PIGWQ7Z7B1 504 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 HASPINQ8TF76 798 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ACOX2Q99424 681 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ULBP1Q9BZM6 244 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 CDT1Q9H211 546 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 DENND2DQ9H6A0 471 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 PARVBQ9HBI1 364 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 NMRK2Q9NPI5 230 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 C15orf38-AP3S2A0A0A6YYH1 394 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 LIN7AO14910 233 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 GPR182O15218 404 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 PSMB9P28065 219 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 EPHA3P29320 983 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 NR1H2P55055 460 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 FASTKD3Q14CZ7 662 aaKnown RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 TATDN1Q6P1N9 297 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 PIWIL4Q7Z3Z4 852 aaKnown RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ARPINQ7Z6K5 226 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 TTC30BQ8N4P2 665 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 C12orf50Q8NA57 414 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 METTL6Q8TCB7 284 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 FIG4Q92562 907 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 DPY30Q9C005 99 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ENTPD7Q9NQZ7 604 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 MYO5BQ9ULV0 1848 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 SLIT3O75094 1523 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 CASTOR2A6NHX0 329 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 RAMP2O60895 175 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 LYPLA1O75608 230 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 BPGMP07738 259 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 GRIA4P48058 902 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ZNF135P52742 658 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 HADHBP55084 474 aaKnown RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 PTPN20Q4JDL3 420 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 TSPAN14Q8NG11 270 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 LRRN4Q8WUT4 740 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 TBL1YQ9BQ87 522 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 TKTL2Q9H0I9 626 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 TMEM245Q9H330 911 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 LGALS13Q9UHV8 139 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 RAP2CQ9Y3L5 183 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 F8W810 466 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 TSPAN3O60637 253 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 SLC2A4P14672 509 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ITGALP20701 1170 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 TTKP33981 857 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 GRIA3P42263 894 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 C21orf59P57076 290 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 PSME3P61289 254 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ELMSAN1Q6PJG2 1045 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ZDHHC13Q8IUH4 622 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 RBM15BQ8NDT2 890 aaKnown RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 RP9Q8TA86 221 aaKnown RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 MARK4Q96L34 752 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ASB2Q96Q27 587 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 LGMNQ99538 433 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ACO2Q99798 780 aaKnown RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 DMAP1Q9NPF5 467 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-203ENST00000375274 ETAA1Q9NY74 926 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 DSEQ9UL01 958 aa11.74□□□□□ -0.53
PTCH1-203ENST00000375274 CCDC154A6NI56 674 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 ENDOD1O94919 500 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 HOXB8P17481 243 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-203ENST00000375274 ATP5F1P24539 256 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-203ENST00000375274 MAPK1P28482 360 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 THPOP40225 353 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms