RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 HOXA4Q00056 320 aaPredicted RBP5.09□□□□□ -1.59
PMS1-202ENST00000374826 LY6KQ17RY6 165 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 SHROOM1Q2M3G4 852 aaPredicted RBP5.09□□□□□ -1.59
PMS1-202ENST00000374826 ARHGAP29Q52LW3 1261 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 CERCAMQ5T4B2 595 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 MTHFD1LQ6UB35 978 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 ZDHHC24Q6UX98 284 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 TRIM72Q6ZMU5 477 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 TECPR1Q7Z6L1 1165 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 SPARTQ8N0X7 666 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 ZKSCAN4Q969J2 545 aaPredicted RBP5.09□□□□□ -1.59
PMS1-202ENST00000374826 PPP2R3CQ969Q6 453 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 SPSB4Q96A44 273 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 DAZAP1Q96EP5 407 aaKnown RBP5.09□□□□□ -1.59
PMS1-202ENST00000374826 LENG8Q96PV6 779 aaPredicted RBP5.09□□□□□ -1.59
PMS1-202ENST00000374826 PPP1R9BQ96SB3 815 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 DNAJC18Q9H819 358 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 FAM204AQ9H8W3 233 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 A1CFQ9NQ94 594 aaKnown RBP5.09□□□□□ -1.59
PMS1-202ENST00000374826 MCM9Q9NXL9 1143 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.09□□□□□ -1.59
PMS1-202ENST00000374826 TCEAL9Q9UHQ7 104 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 SLC4A4Q9Y6R1 1079 aa5.09□□□□□ -1.59
PMS1-202ENST00000374826 DOCK5Q9H7D0 1870 aa5.09□□□□□ -1.6
PMS1-202ENST00000374826 A6NNZ2 444 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 FRS3O43559 492 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 CBSLP0DN79 551 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 SFPQP23246 707 aaKnown RBP eCLIP5.08□□□□□ -1.6
PMS1-202ENST00000374826 CBSP35520 551 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 TDO2P48775 406 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 CYP1B1Q16678 543 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 PTCHD3Q3KNS1 767 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 L1TD1Q5T7N2 865 aaKnown RBP5.08□□□□□ -1.6
PMS1-202ENST00000374826 TMED8Q6PL24 325 aaPredicted RBP5.08□□□□□ -1.6
PMS1-202ENST00000374826 SLC2A7Q6PXP3 512 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 KIRREL2Q6UWL6 708 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 DPY19L3Q6ZPD9 716 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 ZNF589Q86UQ0 364 aaPredicted RBP5.08□□□□□ -1.6
PMS1-202ENST00000374826 MICU3Q86XE3 530 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 CERS3Q8IU89 383 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 ANKRD13AQ8IZ07 590 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 SLC44A5Q8NCS7 719 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 OR56A3Q8NH54 315 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 OPTNQ96CV9 577 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 STRBPQ96SI9 672 aaKnown RBP5.08□□□□□ -1.6
PMS1-202ENST00000374826 C17orf80Q9BSJ5 609 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 THAP7Q9BT49 309 aaPredicted RBP5.08□□□□□ -1.6
PMS1-202ENST00000374826 SPRTNQ9H040 489 aaPredicted RBP5.08□□□□□ -1.6
PMS1-202ENST00000374826 XPNPEP3Q9NQH7 507 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 DIAPH3Q9NSV4 1193 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 SACM1LQ9NTJ5 587 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 CPNE7Q9UBL6 633 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 TPCN1Q9ULQ1 816 aa5.08□□□□□ -1.6
PMS1-202ENST00000374826 ROBO3Q96MS0 1386 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 CCDC171Q6TFL3 1326 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 TRIM43BA6NCK2 446 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 ISM1B1AKI9 464 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 H7C1Q1 480 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 PYCARD-AS1I3L0S3 204 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 AP4M1O00189 453 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 TSPAN6O43657 245 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 KLRC1P26715 233 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 PLCD1P51178 756 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 E2F1Q01094 437 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 LAMB3Q13751 1172 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 INSCQ1MX18 579 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 CWC27Q6UX04 472 aaKnown RBP5.07□□□□□ -1.6
PMS1-202ENST00000374826 CHSY1Q86X52 802 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 SCYL3Q8IZE3 742 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 TERB1Q8NA31 727 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 PNLDC1Q8NA58 520 aaKnown RBP5.07□□□□□ -1.6
PMS1-202ENST00000374826 DNAJB14Q8TBM8 379 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 TRIM43Q96BQ3 446 aaPredicted RBP5.07□□□□□ -1.6
PMS1-202ENST00000374826 NMD3Q96D46 503 aaKnown RBP5.07□□□□□ -1.6
PMS1-202ENST00000374826 RSPRY1Q96DX4 576 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 DYNLL2Q96FJ2 89 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 PRR25Q96S07 402 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 TMEM79Q9BSE2 394 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 ADGRE3Q9BY15 652 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 IL25Q9H293 177 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 DHX36Q9H2U1 1008 aaKnown RBP5.07□□□□□ -1.6
PMS1-202ENST00000374826 HELLSQ9NRZ9 838 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 ATP8A2Q9NTI2 1148 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 PI4KBQ9UBF8 816 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 DDX20Q9UHI6 824 aaKnown RBP5.07□□□□□ -1.6
PMS1-202ENST00000374826 HERC5Q9UII4 1024 aaKnown RBP5.07□□□□□ -1.6
PMS1-202ENST00000374826 G3BP2Q9UN86 482 aaKnown RBP5.07□□□□□ -1.6
PMS1-202ENST00000374826 CDY1Q9Y6F8 540 aa5.07□□□□□ -1.6
PMS1-202ENST00000374826 PSMD9O00233 223 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 HIP1O00291 1037 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 CCP110O43303 1012 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 EXOC3O60645 756 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 SRGAP2O75044 1071 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 RASSF9O75901 435 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 GH2P01242 217 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 HSPA1AP0DMV8 641 aaKnown RBP5.06□□□□□ -1.6
PMS1-202ENST00000374826 HSPA1BP0DMV9 641 aaKnown RBP5.06□□□□□ -1.6
PMS1-202ENST00000374826 FPR3P25089 353 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 TKTP29401 623 aaKnown RBP5.06□□□□□ -1.6
PMS1-202ENST00000374826 SHMT1P34896 483 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms