RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 WASHC5Q12768 1159 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 SCAPQ12770 1279 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 HASPINQ8TF76 798 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 C10orf82Q8WW14 230 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 PTPRN2Q92932 1015 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 TOP1MTQ969P6 601 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 ACBD6Q9BR61 282 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 TRIM55Q9BYV6 548 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 MOCS1Q9NZB8 636 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 CHKBQ9Y259 395 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 MICAL3Q7RTP6 2002 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 PRUNE2Q8WUY3 3088 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 A0A0U1RQF3 1178 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 MGRN1O60291 552 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 RFPL1O75677 317 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 ATP5HO75947 161 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 UNC5CO95185 931 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 AMHP03971 560 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 SKIV2L2P42285 1042 aaKnown RBP12.39□□□□□ -0.43
HMGCL-202ENST00000374487 BRCC3P46736 316 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 HCAR3P49019 387 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 CYS1Q717R9 158 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 TP53INP2Q8IXH6 220 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 NDUFAF2Q8N183 169 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 KIF2BQ8N4N8 673 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 ZNF398Q8TD17 642 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 PGAP3Q96FM1 320 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-202ENST00000374487 GUCD1Q96NT3 240 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 EPAS1Q99814 870 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 NAT9Q9BTE0 207 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 TKTL2Q9H0I9 626 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 ZNF576Q9H609 170 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 CSNK1G1Q9HCP0 422 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 ANLNQ9NQW6 1124 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 OR12D3Q9UGF7 316 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 BAIAP2L1Q9UHR4 511 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 DSEQ9UL01 958 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 PLLPQ9Y342 182 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 RAD54BQ9Y620 910 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 A0A0G2JND7 137 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 HHLA1C9JL84 531 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 CHUKO15111 745 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 PGAM1P18669 254 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 BGNP21810 368 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 CNTFP26441 200 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 DSC3Q14574 896 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 CDHR3Q6ZTQ4 885 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 NLRP9Q7RTR0 991 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 CRIPAKQ8N1N5 446 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 THEM5Q8N1Q8 247 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 OXNAD1Q96HP4 312 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-202ENST00000374487 AGAP3Q96P47 875 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 DMAP1Q9NPF5 467 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-202ENST00000374487 PCMTD2Q9NV79 361 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 IGSF9Q9P2J2 1179 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 STK38LQ9Y2H1 464 aa12.39□□□□□ -0.43
HMGCL-202ENST00000374487 C2CD2LO14523 706 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 CCNB1P14635 433 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 MX2P20592 715 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 EPHB2P29323 1055 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 SERPINB6P35237 376 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 SEMA3BQ13214 749 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
HMGCL-202ENST00000374487 PPP2R2DQ66LE6 453 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 STEAP4Q687X5 459 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 TRIM42Q8IWZ5 723 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 UNC5BQ8IZJ1 945 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 ARMC2Q8NEN0 867 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 PHOSPHO2Q8TCD6 241 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 IRGQQ8WZA9 623 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 RTP3Q9BQQ7 232 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 BRD8Q9H0E9 1235 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 ARHGEF3Q9NR81 526 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 TXNDC16Q9P2K2 825 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 MSRAQ9UJ68 235 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 TRIM33Q9UPN9 1127 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 SQORQ9Y6N5 450 aa12.38□□□□□ -0.43
HMGCL-202ENST00000374487 I6L893 689 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-202ENST00000374487 MTSS1O43312 755 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ALDH1A2O94788 518 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ATP6V1G2O95670 118 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 POLBP06746 335 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 CXCR3P49682 368 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ZNF135P52742 658 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-202ENST00000374487 GRIK3Q13003 919 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 TUSC3Q13454 348 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 CRYMQ14894 314 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 MAPRE1Q15691 268 aaKnown RBP12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ZNF697Q5TEC3 545 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 OVOS1Q6IE37 1185 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 FAM171BQ6P995 826 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 ASRGL1Q7L266 308 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 CCDC91Q7Z6B0 441 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 MTDHQ86UE4 582 aaKnown RBP12.37□□□□□ -0.43
HMGCL-202ENST00000374487 DNAAF3Q8N9W5 541 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 RFWD2Q8NHY2 731 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 MYLIPQ8WY64 445 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 C17orf80Q9BSJ5 609 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 TRIM62Q9BVG3 475 aa12.37□□□□□ -0.43
HMGCL-202ENST00000374487 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms