RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 LPIN3Q9BQK8 851 aa11.67□□□□□ -0.54
PTPN20-204ENST00000374346 DUSP16Q9BY84 665 aa11.67□□□□□ -0.54
PTPN20-204ENST00000374346 ILKAPQ9H0C8 392 aaPredicted RBP11.67□□□□□ -0.54
PTPN20-204ENST00000374346 NSMCE4AQ9NXX6 385 aa11.67□□□□□ -0.54
PTPN20-204ENST00000374346 COX16Q9P0S2 106 aa11.67□□□□□ -0.54
PTPN20-204ENST00000374346 POMPQ9Y244 141 aa11.67□□□□□ -0.54
PTPN20-204ENST00000374346 ZNF195O14628 629 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 BUD23O43709 281 aaKnown RBP11.66□□□□□ -0.54
PTPN20-204ENST00000374346 RECQL4O94761 1208 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 THRAP10827 490 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 COX4I1P13073 169 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 CSE1LP55060 971 aaKnown RBP11.66□□□□□ -0.54
PTPN20-204ENST00000374346 RASIP1Q5U651 963 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 ALKAL1Q6UXT8 129 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 CMC1Q7Z7K0 106 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 TNS4Q8IZW8 715 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 B3GALNT2Q8NCR0 500 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 OR52K1Q8NGK4 314 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 NT5C3BQ969T7 300 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 AGAP3Q96P47 875 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 NPY6RQ99463 290 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 EIF2AQ9BY44 585 aaKnown RBP11.66□□□□□ -0.54
PTPN20-204ENST00000374346 NMRAL1Q9HBL8 299 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 TCF7L2Q9NQB0 619 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 CPSF2Q9P2I0 782 aaKnown RBP11.66□□□□□ -0.54
PTPN20-204ENST00000374346 TRHDEQ9UKU6 1024 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 SSX2IPQ9Y2D8 614 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 PDCD11Q14690 1871 aaKnown RBP11.66□□□□□ -0.54
PTPN20-204ENST00000374346 PDE5AO76074 875 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 PRKCGP05129 697 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 UQCRBP14927 111 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 NPR3P17342 541 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 ITGAXP20702 1163 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 AXLP30530 894 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 NPY2RP49146 381 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 POLE2P56282 527 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 DPYSQ14117 519 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 DGKDQ16760 1214 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 ARL13BQ3SXY8 428 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 MARCH8Q5T0T0 291 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 VWA5B1Q5TIE3 1220 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 AP1ARQ63HQ0 302 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 CES3Q6UWW8 571 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 C16orf89Q6UX73 402 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 SETD3Q86TU7 594 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-204ENST00000374346 LCA5Q86VQ0 697 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 TDRD5Q8NAT2 981 aaKnown RBP11.66□□□□□ -0.54
PTPN20-204ENST00000374346 ICA1LQ8NDH6 482 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 RDH11Q8TC12 318 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 URGCPQ8TCY9 931 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 GDPD5Q8WTR4 605 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 ATXN7L3BQ96GX2 97 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 VAT1Q99536 393 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 HNRNPABQ99729 332 aaKnown RBP11.66□□□□□ -0.54
PTPN20-204ENST00000374346 IL22Q9GZX6 179 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 ADARB2Q9NS39 739 aaKnown RBP11.66□□□□□ -0.54
PTPN20-204ENST00000374346 SETD4Q9NVD3 440 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 TLK1Q9UKI8 766 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 PRPF19Q9UMS4 504 aaKnown RBP11.66□□□□□ -0.54
PTPN20-204ENST00000374346 ANKRD6Q9Y2G4 727 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 HES2Q9Y543 173 aa11.66□□□□□ -0.54
PTPN20-204ENST00000374346 ZNF638Q14966 1978 aaKnown RBP11.65□□□□□ -0.54
PTPN20-204ENST00000374346 RBM47A0AV96 593 aaKnown RBP11.65□□□□□ -0.54
PTPN20-204ENST00000374346 ADM5C9JUS6 153 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 KCNK1O00180 336 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 HCRTO43612 131 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 DNAJB2P25686 324 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 PTPN3P26045 913 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 MTTPP55157 894 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 TPI1P60174 286 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 MPP3Q13368 585 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 CCNIQ14094 377 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 MMEL1Q495T6 779 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 INTS6LQ5JSJ4 861 aaKnown RBP11.65□□□□□ -0.54
PTPN20-204ENST00000374346 CWF19L1Q69YN2 538 aaKnown RBP11.65□□□□□ -0.54
PTPN20-204ENST00000374346 FRMD7Q6ZUT3 714 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 ZNF781Q8N8C0 355 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 KCTD13Q8WZ19 329 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 FCRL3Q96P31 734 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-204ENST00000374346 SHCBP1LQ9BZQ2 653 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 FAM49AQ9H0Q0 323 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-204ENST00000374346 EBF3Q9H4W6 596 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 SMIM28A0A1B0GU29 152 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-204ENST00000374346 E9PBE3 544 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 SLCO1B7G3V0H7 640 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 DCLK1O15075 740 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 SLC22A2O15244 555 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 PEX1O43933 1283 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 KLHL41O60662 606 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 FBXO21O94952 628 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 ADCYAP1R1P41586 468 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 ZNF135P52742 658 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-204ENST00000374346 PPIDQ08752 370 aaKnown RBP11.65□□□□□ -0.54
PTPN20-204ENST00000374346 TMEM62Q0P6H9 643 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 USP4Q13107 963 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 KLF10Q13118 480 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 PRPSAP1Q14558 356 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 TRIP10Q15642 601 aa11.65□□□□□ -0.54
PTPN20-204ENST00000374346 LRRC36Q1X8D7 754 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms