RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 MAPK15Q8TD08 544 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 AMNQ9BXJ7 453 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 NANOGQ9H9S0 305 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 ALOX5P09917 674 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 MYF6P23409 242 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 RFC1P35251 1148 aaPredicted RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 SNAP25P60880 206 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 ART3Q13508 389 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 PPP4R4Q6NUP7 873 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 MMAAQ8IVH4 418 aaKnown RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 TMCO5AQ8N6Q1 288 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 ATP6V0D2Q8N8Y2 350 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 ACMSDQ8TDX5 336 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 MFSD14AQ96MC6 490 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 ACO2Q99798 780 aaKnown RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 MRPL46Q9H2W6 279 aaKnown RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 RNPEPQ9H4A4 650 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 NOL11Q9H8H0 719 aaKnown RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 CD209Q9NNX6 404 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 ANKMY1Q9P2S6 941 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 NXF1Q9UBU9 619 aaKnown RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 SERPINB13Q9UIV8 391 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 WDR90Q96KV7 1748 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 TESPA1A2RU30 521 aaPredicted RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 TRIM38O00635 465 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 S100BP04271 92 aaPredicted RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 QARSP47897 775 aaKnown RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 RHDQ02161 417 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 E2F2Q14209 437 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 SMTNL2Q2TAL5 461 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
PRPF4-201ENST00000374198 DNAJC24Q6P3W2 148 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 C14orf80Q86SX3 495 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 ZNF781Q8N8C0 355 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 MINDY2Q8NBR6 621 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 PDPRQ8NCN5 879 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 ASB9Q96DX5 294 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 FAM84AQ96KN4 292 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 ZNF347Q96SE7 839 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 RAB6BQ9NRW1 208 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 COPG2Q9UBF2 871 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 PCDHB12Q9Y5F1 795 aa13.18□□□□□ -0.3
PRPF4-201ENST00000374198 TCRBV5S1A1TA0A578 114 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 SLC15A5A6NIM6 579 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 YDJCA8MPS7 323 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 PRKCGP05129 697 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 CKMT2P17540 419 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 ACO1P21399 889 aaKnown RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 PROZP22891 400 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 KDELR1P24390 212 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 CNTFP26441 200 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 MLLT10P55197 1068 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 RFTN1Q14699 578 aaPredicted RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 TBC1D10BQ4KMP7 808 aaPredicted RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 HMBOX1Q6NT76 420 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 USP37Q86T82 979 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 CAND1Q86VP6 1230 aaKnown RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 HERC6Q8IVU3 1022 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 CPSF7Q8N684 471 aaKnown RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 SLCO4A1Q96BD0 722 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 DCPSQ96C86 337 aaKnown RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 UHRF1Q96T88 793 aaPredicted RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 VRTNQ9H8Y1 702 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 EFCAB1Q9HAE3 211 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 DCDC2Q9UHG0 476 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 TMA7Q9Y2S6 64 aaKnown RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 TRAF6Q9Y4K3 522 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 LTBP1Q14766 1721 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 MYH9P35579 1960 aaKnown RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 GOLGA8QA0A0J9YX86 632 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 GOLGA8OA6NCC3 632 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 NOTOA8MTQ0 251 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 A8MU76 341 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 C9IYK1 514 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 GOLGA8NF8WBI6 632 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 APOC4-APOC2K7ER74 178 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 SOCS2O14508 198 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 SLC16A4O15374 487 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 GMNNO75496 209 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 JRKO75564 520 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 SEC24DO94855 1032 aaPredicted RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 VAPBO95292 243 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 CHEK2O96017 543 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 APOC2P02655 101 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 IDUAP35475 653 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 GRIA3P42263 894 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 CYP24A1Q07973 514 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 TAZQ16635 292 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 KCNT1Q5JUK3 1230 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 PERM1Q5SV97 790 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 DARS2Q6PI48 645 aaKnown RBP13.17□□□□□ -0.3
PRPF4-201ENST00000374198 KCTD8Q6ZWB6 473 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 CHSY3Q70JA7 882 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 NIPA2Q8N8Q9 360 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 SPATA18Q8TC71 538 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 DEPDC1BQ8WUY9 529 aa13.17□□□□□ -0.3
PRPF4-201ENST00000374198 ST6GALNAC4Q9H4F1 302 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms