RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 KLC3Q6P597 504 aa14□□□□□ -0.17
USP49-201ENST00000373006 TSHZ1Q6ZSZ6 1077 aa14□□□□□ -0.17
USP49-201ENST00000373006 CLEC4CQ8WTT0 213 aa14□□□□□ -0.17
USP49-201ENST00000373006 HTR3CQ8WXA8 447 aa14□□□□□ -0.17
USP49-201ENST00000373006 ZFRQ96KR1 1074 aaKnown RBP14□□□□□ -0.17
USP49-201ENST00000373006 CATSPER2Q96P56 530 aa14□□□□□ -0.17
USP49-201ENST00000373006 LPIN3Q9BQK8 851 aa14□□□□□ -0.17
USP49-201ENST00000373006 MINDY3Q9H8M7 445 aa14□□□□□ -0.17
USP49-201ENST00000373006 MYOZ2Q9NPC6 264 aa14□□□□□ -0.17
USP49-201ENST00000373006 TRMUO75648 421 aaKnown RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 UBA1P22314 1058 aaKnown RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 PHKA2P46019 1235 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 RPL26P61254 145 aaKnown RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 GOLGA7BQ2TAP0 167 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 SH3D19Q5HYK7 790 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 ZNF410Q86VK4 478 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 GAB3Q8WWW8 586 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 KHSRPQ92945 711 aaKnown RBP eCLIP13.99□□□□□ -0.17
USP49-201ENST00000373006 TMA16Q96EY4 203 aaKnown RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 HPDLQ96IR7 371 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 KLHL32Q96NJ5 620 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 AGAP3Q96P47 875 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 FERMT1Q9BQL6 677 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 ZNF670Q9BS34 389 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 MAF1Q9H063 256 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 GBA2Q9HCG7 927 aaPredicted RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 THSD7AQ9UPZ6 1657 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 ZNF646O15015 1829 aaPredicted RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 RGSL1A5PLK6 1076 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 GPR25O00155 361 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 XPO1O14980 1071 aaKnown RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 CSPG5O95196 566 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 GOT1P17174 413 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 GLDCP23378 1020 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 PPP2R5DQ14738 602 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 PPP1R26Q5T8A7 1209 aaPredicted RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 FKBP1CQ5VVH2 108 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 STEAP4Q687X5 459 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 STRA8Q7Z7C7 330 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 AHI1Q8N157 1196 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 ACVR1CQ8NER5 493 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 FLAD1Q8NFF5 587 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 REPS2Q8NFH8 660 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 ZNF512Q96ME7 567 aaPredicted RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 FCRL3Q96P31 734 aaPredicted RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 CDT1Q9H211 546 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 G3V2L1 256 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 GOLGA8TH3BQL2 631 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 P4HA1P13674 534 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 PTPN1P18031 435 aaKnown RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 FGFR3P22607 806 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 PPIDQ08752 370 aaKnown RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 PIGGQ5H8A4 983 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 FSTL4Q6MZW2 842 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 OLFML1Q6UWY5 402 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 C16orf89Q6UX73 402 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 CCNYQ8ND76 341 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 KCNN1Q92952 543 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 GATA5Q9BWX5 397 aaPredicted RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
USP49-201ENST00000373006 ACAD9Q9H845 621 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 ANLNQ9NQW6 1124 aa13.99□□□□□ -0.17
USP49-201ENST00000373006 A0A096LPK6 155 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 ARHGAP10A1A4S6 786 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 RNASEH2AO75792 299 aaKnown RBP13.98□□□□□ -0.17
USP49-201ENST00000373006 JUNP05412 331 aaKnown RBP13.98□□□□□ -0.17
USP49-201ENST00000373006 IQCF3P0C7M6 154 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 PGAM1P18669 254 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 CDH2P19022 906 aaPredicted RBP13.98□□□□□ -0.17
USP49-201ENST00000373006 PSMB4P28070 264 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 ITGA7Q13683 1181 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 CCDC185Q8N715 623 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 TRIML2Q8N7C3 387 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 EME1Q96AY2 570 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 CSPG4P5Q96PW8 444 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 NPAS2Q99743 824 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 SLC4A5Q9BY07 1137 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 ZNF696Q9H7X3 374 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 HESX1Q9UBX0 185 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 AP4E1Q9UPM8 1137 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 CENPFP49454 3210 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 PAPSS1O43252 624 aaPredicted RBP13.98□□□□□ -0.17
USP49-201ENST00000373006 PRDX6P30041 224 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 GP5P40197 560 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 ART3Q13508 389 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 INSCQ1MX18 579 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 CYS1Q717R9 158 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 ACOT1Q86TX2 421 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 TICAM1Q8IUC6 712 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 ATP6V1E2Q96A05 226 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 CERS2Q96G23 380 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 QKIQ96PU8 341 aaKnown RBP eCLIP13.98□□□□□ -0.175e-8■■■■■ 29.9
USP49-201ENST00000373006 WDR41Q9HAD4 459 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 PTPRHQ9HD43 1115 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 GGA3Q9NZ52 723 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 RBMX2Q9Y388 322 aaKnown RBP13.98□□□□□ -0.17
USP49-201ENST00000373006 CEPT1Q9Y6K0 416 aa13.98□□□□□ -0.17
USP49-201ENST00000373006 A0A0A0MRY4 1105 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 CCDC78A2IDD5 438 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 TRIM43BA6NCK2 446 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms