RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 C12orf29Q8N999 325 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 SLC7A14Q8TBB6 771 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 GDPD5Q8WTR4 605 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 TRAPPC12Q8WVT3 735 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 ARNTL2Q8WYA1 636 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 GFM2Q969S9 779 aaKnown RBP11.13□□□□□ -0.63
LCN2-202ENST00000372998 C18orf25Q96B23 403 aaPredicted RBP11.13□□□□□ -0.63
LCN2-202ENST00000372998 DCPSQ96C86 337 aaKnown RBP11.13□□□□□ -0.63
LCN2-202ENST00000372998 HDAC11Q96DB2 347 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 PGAP3Q96FM1 320 aaPredicted RBP11.13□□□□□ -0.63
LCN2-202ENST00000372998 LRGUKQ96M69 825 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 SLC2A13Q96QE2 648 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 NPY6RQ99463 290 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 SORT1Q99523 831 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 EBF4Q9BQW3 602 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 DUSP16Q9BY84 665 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 DRC3Q9H069 523 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 RNPEPQ9H4A4 650 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 EFCAB1Q9HAE3 211 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 NMRAL1Q9HBL8 299 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 TCF7L2Q9NQB0 619 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 FAM49BQ9NUQ9 324 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 SETD4Q9NVD3 440 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 CNOT11Q9UKZ1 510 aaKnown RBP11.13□□□□□ -0.63
LCN2-202ENST00000372998 VANGL2Q9ULK5 521 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 PADI4Q9UM07 663 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 SCAF8Q9UPN6 1271 aaKnown RBP11.13□□□□□ -0.63
LCN2-202ENST00000372998 POMPQ9Y244 141 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 AAR2Q9Y312 384 aaKnown RBP11.13□□□□□ -0.63
LCN2-202ENST00000372998 DTNAQ9Y4J8 743 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 OTOFQ9HC10 1997 aa11.13□□□□□ -0.63
LCN2-202ENST00000372998 A0A096LPK6 155 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 H3BRB1 525 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 PIRO00625 290 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 ITM2AO43736 263 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 NPHS1O60500 1241 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 TADA2AO75478 443 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 IQCF3P0C7M6 154 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 LCP1P13796 627 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 VAV1P15498 845 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 GOT1P17174 413 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 VCLP18206 1134 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 ITGAXP20702 1163 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 KCNA4P22459 653 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 GLDCP23378 1020 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 RGS2P41220 211 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 RPL14P50914 215 aaKnown RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 NRLP54845 237 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 POLE2P56282 527 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 SLC25A3Q00325 362 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 PPIDQ08752 370 aaKnown RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 CDH17Q12864 832 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 MTM1Q13496 603 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 SLC12A1Q13621 1099 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 CYLC2Q14093 348 aaPredicted RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 CCNIQ14094 377 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 DPYSQ14117 519 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 MDH1BQ5I0G3 518 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 SYCP2LQ5T4T6 812 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 OGFRL1Q5TC84 451 aaPredicted RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 IRAK1BP1Q5VVH5 260 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 C16orf46Q6P387 395 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 BNC2Q6ZN30 1099 aaPredicted RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 ZCCHC23Q6ZST2 131 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 RFX8Q6ZV50 586 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 CATSPER4Q7RTX7 472 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 BNIPLQ7Z465 357 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 LIMS2Q7Z4I7 341 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 CLEC14AQ86T13 490 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 CDR2LQ86X02 465 aaPredicted RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 SULF1Q8IWU6 871 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 PGAM4Q8N0Y7 254 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 ZNF567Q8N184 647 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 PQLC1Q8N2U9 271 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 MARVELD2Q8N4S9 558 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 DCLK2Q8N568 766 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 C7orf31Q8N865 590 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 DNAAF3Q8N9W5 541 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 TDRD5Q8NAT2 981 aaKnown RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 GSTCDQ8NEC7 633 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 URGCPQ8TCY9 931 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 ZNF669Q96BR6 464 aaPredicted RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 PIWIL1Q96J94 861 aaKnown RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 MAML3Q96JK9 1138 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 EPAS1Q99814 870 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 SPATA16Q9BXB7 569 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 UBE2OQ9C0C9 1292 aaKnown RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 GBA3Q9H227 469 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 TUT1Q9H6E5 874 aaKnown RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 TRPC7Q9HCX4 862 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 OXSMQ9NWU1 459 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 SYBUQ9NX95 663 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 UTP6Q9NYH9 597 aaKnown RBP11.12□□□□□ -0.63
LCN2-202ENST00000372998 TMEM216Q9P0N5 145 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 PPM1HQ9ULR3 514 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 CDYLQ9Y232 598 aa11.12□□□□□ -0.63
LCN2-202ENST00000372998 A0A087X1B8 175 aa11.11□□□□□ -0.63
LCN2-202ENST00000372998 SMIM35A0A1B0GVV1 85 aa11.11□□□□□ -0.63
LCN2-202ENST00000372998 ARHGAP10A1A4S6 786 aa11.11□□□□□ -0.63
LCN2-202ENST00000372998 MATN2O00339 956 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms