RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 PAGE2BQ5JRK9 111 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 PGM2Q96G03 612 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 FICDQ9BVA6 458 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 PTTG2Q9NZH5 202 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 TBC1D30Q9Y2I9 924 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 G3V2T6 193 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 NAMPTP43490 491 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 RGS1Q08116 209 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 FAM187BQ17R55 369 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 PACS1Q6VY07 963 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 ZNF438Q7Z4V0 828 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 TBC1D10CQ8IV04 446 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 OFCC1Q8IZS5 231 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 EIF1ADQ8N9N8 165 aaKnown RBP15.53■□□□□ 0.08
COL5A1-201ENST00000371817 KBTBD7Q8WVZ9 684 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 DPYSL4O14531 572 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 SWSAP1Q6NVH7 229 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 OR52L1Q8NGH7 329 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 REXO5Q96IC2 774 aaKnown RBP15.53■□□□□ 0.08
COL5A1-201ENST00000371817 REEP2Q9BRK0 252 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 GPATCH1Q9BRR8 931 aaKnown RBP15.53■□□□□ 0.08
COL5A1-201ENST00000371817 DHRS7Q9Y394 339 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 PCDHGA4Q9Y5G9 962 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 UMODL1Q5DID0 1318 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 MAGP20916 626 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 ACOT2P49753 483 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 CSHL1Q14406 222 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 GRM4Q14833 912 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 DCPSQ96C86 337 aaKnown RBP15.53■□□□□ 0.08
COL5A1-201ENST00000371817 CPNE1Q99829 537 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 SLC35C2Q9NQQ7 365 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 RAB26Q9ULW5 256 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 CACNA1FO60840 1977 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 MAP2P11137 1827 aaKnown RBP15.53■□□□□ 0.08
COL5A1-201ENST00000371817 RPA1P27694 616 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 RFX4Q33E94 735 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 LCN1P1Q5VSP4 162 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 C11orf24Q96F05 449 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-201ENST00000371817 MAN1C1Q9NR34 630 aa15.53■□□□□ 0.08
COL5A1-201ENST00000371817 FGRP09769 529 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 RPA3P35244 121 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-201ENST00000371817 CCNG2Q16589 344 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 ZBTB8BQ8NAP8 495 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-201ENST00000371817 CKAP2Q8WWK9 683 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 ORC5O43913 435 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 ZBTB11O95625 1053 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-201ENST00000371817 MAGEA12P43365 314 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 POTEHQ6S545 545 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 CINPQ9BW66 212 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-201ENST00000371817 TOR3AQ9H497 397 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 PCDH9Q9HC56 1237 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 CLDN25C9JDP6 229 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 TMED8Q6PL24 325 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-201ENST00000371817 PARP8Q8N3A8 854 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 ACTR8Q9H981 624 aa15.52■□□□□ 0.08
COL5A1-201ENST00000371817 E7ENX8 843 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 PLK4O00444 970 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 CAMK1Q14012 370 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 PM20D2Q8IYS1 436 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 TMCO6Q96DC7 493 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 ACOX2Q99424 681 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 TMEM216Q9P0N5 145 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 GRIP1Q9Y3R0 1128 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 USP12O75317 370 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 ITGA7Q13683 1181 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 MID1IP1Q9NPA3 183 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 TMEM260Q9NX78 707 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.52■□□□□ 0.07
COL5A1-201ENST00000371817 DHRS12A0PJE2 317 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 IRF2BPLQ9H1B7 796 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 USP18Q9UMW8 372 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 PPM1BO75688 479 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 NCAM1P13591 858 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 ST8SIA6P61647 398 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 DNAJC14Q6Y2X3 702 aaPredicted RBP15.52■□□□□ 0.07
COL5A1-201ENST00000371817 PIWIL2Q8TC59 973 aaKnown RBP15.52■□□□□ 0.07
COL5A1-201ENST00000371817 DQX1Q8TE96 717 aaKnown RBP15.52■□□□□ 0.07
COL5A1-201ENST00000371817 COPS4Q9BT78 406 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 ZNF341Q9BYN7 854 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 AHSPQ9NZD4 102 aa15.52■□□□□ 0.07
COL5A1-201ENST00000371817 AATKQ6ZMQ8 1374 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 OPLAHO14841 1288 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 MT-CO1P00395 513 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 RB1P06400 928 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 CDH4P55283 916 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 TIGD7Q6NT04 549 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-201ENST00000371817 VPS4AQ9UN37 437 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 CASKO14936 926 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 GEMP55040 296 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 MGAT5Q09328 741 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 ILF2Q12905 390 aaKnown RBP15.51■□□□□ 0.07
COL5A1-201ENST00000371817 AAGABQ6PD74 315 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 ZNF621Q6ZSS3 439 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 KCNK18Q7Z418 384 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 CBWD2Q8IUF1 395 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 PIK3R3Q92569 461 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 TMEM47Q9BQJ4 181 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 BTG4Q9NY30 223 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 H7C2Y5 167 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 MAGEB2O15479 319 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms