RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ZNF212Q9UDV6 495 aa17.96■□□□□ 0.47
SSBP3-203ENST00000371319 MYO18AQ92614 2054 aaKnown RBP17.96■□□□□ 0.47
SSBP3-203ENST00000371319 EXOC1LA0A1B0GW35 172 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 MAFKO60675 156 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 SHOX2O60902 331 aaPredicted RBP17.96■□□□□ 0.46
SSBP3-203ENST00000371319 PHBP35232 272 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 LMAN1P49257 510 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 PAPOLAP51003 745 aaKnown RBP17.96■□□□□ 0.46
SSBP3-203ENST00000371319 ACBD5Q5T8D3 534 aaPredicted RBP17.96■□□□□ 0.46
SSBP3-203ENST00000371319 C3orf62Q6ZUJ4 267 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 DNAJB7Q7Z6W7 309 aaPredicted RBP17.96■□□□□ 0.46
SSBP3-203ENST00000371319 TMEM150AQ86TG1 271 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 TDRPQ86YL5 185 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 CYP4X1Q8N118 509 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 UMODL1-AS1Q8N2C9 162 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 FBF1Q8TES7 1133 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 MYEOVQ96EZ4 313 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 SIGLEC10Q96LC7 697 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 TEKT5Q96M29 485 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 STMN4Q9H169 189 aaPredicted RBP17.96■□□□□ 0.46
SSBP3-203ENST00000371319 PLAC1Q9HBJ0 212 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 XAB2Q9HCS7 855 aaKnown RBP17.96■□□□□ 0.46
SSBP3-203ENST00000371319 ZNF334Q9HCZ1 680 aaPredicted RBP17.96■□□□□ 0.46
SSBP3-203ENST00000371319 PRDM10Q9NQV6 1147 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 RSPH14Q9UHP6 348 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 SSX2IPQ9Y2D8 614 aa17.96■□□□□ 0.46
SSBP3-203ENST00000371319 LCHNA4D1U4 455 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 CDH16O75309 829 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 OAS1P00973 400 aaKnown RBP17.95■□□□□ 0.46
SSBP3-203ENST00000371319 JCHAINP01591 159 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 MLNP12872 115 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 TACR2P21452 398 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 EPHB3P54753 998 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 MTA1Q13330 715 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 EFTUD2Q15029 972 aaKnown RBP eCLIP17.95■□□□□ 0.464e-7■■■■■ 32.3
SSBP3-203ENST00000371319 TAF12Q16514 161 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 LRRC8BQ6P9F7 803 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 MPP5Q8N3R9 675 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 RIBC1Q8N443 379 aaPredicted RBP17.95■□□□□ 0.46
SSBP3-203ENST00000371319 ARFGAP2Q8N6H7 521 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 PSMG2Q969U7 264 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 LRRC39Q96DD0 335 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 RAD9AQ99638 391 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 CAPS2Q9BXY5 557 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 ACSS3Q9H6R3 686 aa17.95■□□□□ 0.46
SSBP3-203ENST00000371319 C2orf78A6NCI8 922 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 MATN3O15232 486 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 TGM5O43548 720 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 ACSL4O60488 711 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 CXCL14O95715 111 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 SPATA31D3P0C874 917 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 NFKB1P19838 968 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 MMP13P45452 471 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 PPP3CCP48454 512 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 NDST2P52849 883 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 C5orf22Q49AR2 442 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 ITPRIPL1Q6GPH6 555 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 SPATA31D4Q6ZUB0 917 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 TFAP2DQ7Z6R9 452 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 EXOC3L1Q86VI1 746 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 CHSY1Q86X52 802 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 KLHDC8BQ8IXV7 354 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 CNTD1Q8N815 330 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 PLD4Q96BZ4 506 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 CFAP36Q96G28 342 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 AGAP3Q96P47 875 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 KLHL5Q96PQ7 755 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 IL12RB2Q99665 862 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 MLPHQ9BV36 600 aaPredicted RBP17.94■□□□□ 0.46
SSBP3-203ENST00000371319 KLF16Q9BXK1 252 aaPredicted RBP17.94■□□□□ 0.46
SSBP3-203ENST00000371319 NACA2Q9H009 215 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 RNF38Q9H0F5 515 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 PPCSQ9HAB8 311 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 FETUBQ9UGM5 382 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 SLC4A7Q9Y6M7 1214 aa17.94■□□□□ 0.46
SSBP3-203ENST00000371319 POC1B-GALNT4F8VUJ3 575 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 CACNG3O60359 315 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 SUN1O94901 812 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 F11P03951 625 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 ATP2A2P16615 1042 aaKnown RBP17.93■□□□□ 0.46
SSBP3-203ENST00000371319 SYN1P17600 705 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 SLC6A4P31645 630 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 CA8P35219 290 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 SARNPP82979 210 aaKnown RBP17.93■□□□□ 0.46
SSBP3-203ENST00000371319 SPARCL1Q14515 664 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 FAM133BQ5BKY9 247 aaKnown RBP17.93■□□□□ 0.46
SSBP3-203ENST00000371319 KCTD11Q693B1 232 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 LILRA6Q6PI73 481 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 LRRC49Q8IUZ0 686 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 PHOSPHO2Q8TCD6 241 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 USP33Q8TEY7 942 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 MAML1Q92585 1016 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 ZNF419Q96HQ0 510 aaPredicted RBP17.93■□□□□ 0.46
SSBP3-203ENST00000371319 XPO6Q96QU8 1125 aaKnown RBP17.93■□□□□ 0.46
SSBP3-203ENST00000371319 DHRS4Q9BTZ2 278 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 IL21Q9HBE4 155 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 UXTQ9UBK9 157 aaPredicted RBP17.93■□□□□ 0.46
SSBP3-203ENST00000371319 SLC24A2Q9UI40 661 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 TTLL3Q9Y4R7 772 aa17.93■□□□□ 0.46
SSBP3-203ENST00000371319 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms