RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 MARCH2Q9P0N8 246 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 HES2Q9Y543 173 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 COL1A2P08123 1366 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 TPP1O14773 563 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 MRASO14807 208 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 RAD51BO15315 384 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 BAIAP3O94812 1187 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 ENDOD1O94919 500 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 NEK2P51955 445 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 AIF1P55008 147 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 BST1Q10588 318 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 PTPN20Q4JDL3 420 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 SAMD4BQ5PRF9 694 aaKnown RBP12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 UNC5AQ6ZN44 842 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 LRRC74BQ6ZQY2 392 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 STRADAQ7RTN6 431 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 APTXQ7Z2E3 356 aaKnown RBP12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 GPR141Q7Z602 305 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 TRIM69Q86WT6 500 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 SNX32Q86XE0 403 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 OR56A4Q8NGH8 313 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 PLEKHA8Q96JA3 519 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 SPATA17Q96L03 361 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 SH3GL2Q99962 352 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 UBA2Q9UBT2 640 aaPredicted RBP12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 ZNF229Q9UJW7 825 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 BIRC5O15392 142 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 CABYRO75952 493 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 SNUPNO95149 360 aaKnown RBP12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 SMIM10L2AP0DMW4 78 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 SMIM10L2BP0DMW5 78 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 ANXA11P50995 505 aaKnown RBP12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 SCNN1GP51170 649 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 CYP51A1Q16850 503 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 SHROOM1Q2M3G4 852 aaPredicted RBP12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 C16orf46Q6P387 395 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 LCLAT1Q6UWP7 414 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 OTOAQ7RTW8 1153 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 MTMR14Q8NCE2 650 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 TMEM109Q9BVC6 243 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 NEUROG2Q9H2A3 272 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 STN1Q9H668 368 aaKnown RBP12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 ERVK-5Q9HDB9 667 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 IMPAD1Q9NX62 359 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 SALL4Q9UJQ4 1053 aa12.07□□□□□ -0.48
DEPDC1-201ENST00000370966 F8W810 466 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 MTA2O94776 668 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 ERCC2P18074 760 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 ICAM3P32942 547 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 CCNG1P51959 295 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 NAGLUP54802 743 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 NME5P56597 212 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 CENPLQ8N0S6 344 aaPredicted RBP12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 NSMCE2Q96MF7 247 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 PARVBQ9HBI1 364 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 MID1IP1Q9NPA3 183 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 SPEF2Q9C093 1822 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 MT-CO1P00395 513 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 PROCP04070 461 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 SOAT1P35610 550 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 TRPC1P48995 793 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 PCYT1AP49585 367 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 PSEN1P49768 467 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 CRYBB1P53674 252 aaPredicted RBP12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 FRG1Q14331 258 aaKnown RBP12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 SLC39A12Q504Y0 691 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 TBCELQ5QJ74 424 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 DHFR2Q86XF0 187 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 STK40Q8N2I9 435 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 TOP6BLQ8N6T0 577 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 DLG3Q92796 817 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 PGLYRP2Q96PD5 576 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 NTPCRQ9BSD7 190 aaKnown RBP12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 TCRBV9S1A1TA0A576 114 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 PHGDHO43175 533 aaKnown RBP12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 LZTS3O60299 673 aaPredicted RBP12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 PLIN5Q00G26 463 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 HSDL1Q3SXM5 330 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 TSHZ1Q6ZSZ6 1077 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 PIWIL4Q7Z3Z4 852 aaKnown RBP12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 OSCP1Q8WVF1 389 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 GPR20Q99678 358 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 TCHHQ07283 1943 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 NOMO1Q15155 1222 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 SDE2Q6IQ49 451 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 IRGCQ6NXR0 463 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 SH3BP5LQ7L8J4 393 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 LGI2Q8N0V4 545 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 JOSD2Q8TAC2 188 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 FAM120BQ96EK7 910 aaKnown RBP12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 CDRT15Q96T59 188 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 TBC1D10AQ9BXI6 508 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 DPY30Q9C005 99 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 PCDH18Q9HCL0 1135 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 RCOR3Q9P2K3 495 aaPredicted RBP12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 COQ4Q9Y3A0 265 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 RIPK3Q9Y572 518 aa12.06□□□□□ -0.48
DEPDC1-201ENST00000370966 hCG_2014768A0A024R1R8 64 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 PMM2O15305 246 aa12.05□□□□□ -0.48
DEPDC1-201ENST00000370966 EDF1O60869 148 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms