RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 PSMD4P55036 377 aaKnown RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 EFR3AQ14156 821 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 GNA13Q14344 377 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 PRR5LQ6MZQ0 368 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF276Q8N554 614 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 RXFP2Q8WXD0 754 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 MRPS31Q92665 395 aaKnown RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 TAS2R13Q9NYV9 303 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 NUDT5Q9UKK9 219 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 R3HDM2Q9Y2K5 976 aaKnown RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 CTDNEP1O95476 244 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 NEK3P51956 506 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 C8orf59Q8N0T1 100 aaPredicted RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 ATXN2LQ8WWM7 1075 aaKnown RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 RASSF5Q8WWW0 418 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF75CPQ92670 426 aaPredicted RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 EPB41L1Q9H4G0 881 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 GPATCH2LQ9NWQ4 482 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 PIH1D1Q9NWS0 290 aaKnown RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 PROCP04070 461 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 CHRNA5P30532 468 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 EIF2S3LQ2VIR3 472 aaKnown RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 IL27RAQ6UWB1 636 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 TMEM159Q96B96 161 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 HGH1Q9BTY7 390 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 ARHGAP28Q9P2N2 729 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 TNS3Q68CZ2 1445 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 OCLNQ16625 522 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 TMC3Q7Z5M5 1100 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 NYAP2Q9P242 653 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 FCHO1O14526 889 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 OR6A2O95222 327 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 ATF4P18848 351 aaPredicted RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 MGAT1P26572 445 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 OR1E1P30953 314 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 PAN2Q504Q3 1202 aaKnown RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 INO80DQ53TQ3 878 aaPredicted RBP12.67□□□□□ -0.38
HCFC1-202ENST00000369984 MILR1Q7Z6M3 343 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 FNIP1Q8TF40 1166 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 CEP41Q9BYV8 373 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 LRRC4BQ9NT99 713 aa12.67□□□□□ -0.38
HCFC1-202ENST00000369984 MRPS22P82650 360 aaKnown RBP12.66□□□□□ -0.38
HCFC1-202ENST00000369984 BOP1Q14137 746 aaKnown RBP12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ILDR2Q71H61 639 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 RNF44Q7L0R7 432 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 TBCDQ9BTW9 1192 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 SEMA4AQ9H3S1 761 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 L2HGDHQ9H9P8 463 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 RBM22Q9NW64 420 aaKnown RBP eCLIP12.66□□□□□ -0.383e-9■■■□□ 18.9
HCFC1-202ENST00000369984 ELK3P41970 407 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CCR4P51679 360 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ADIGQ0VDE8 80 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 TOMM20Q15388 145 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 TEKT5Q96M29 485 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 PLA2G12BQ9BX93 195 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 MCUBQ9NWR8 336 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ANGEL2Q5VTE6 544 aaKnown RBP12.66□□□□□ -0.38
HCFC1-202ENST00000369984 TFAP2DQ7Z6R9 452 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 MAGEE2Q8TD90 523 aaPredicted RBP12.66□□□□□ -0.38
HCFC1-202ENST00000369984 STARD8Q92502 1023 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 TMEM39BQ9GZU3 492 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 SHOC2Q9UQ13 582 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 PLA2R1Q13018 1463 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 HIST1H2ABP04908 130 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CEBPGP53567 150 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 MCL1Q07820 350 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 HIST3H2AQ7L7L0 130 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CCDC185Q8N715 623 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 HIST1H2ACQ93077 130 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CBWD1Q9BRT8 395 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CCDC28BQ9BUN5 200 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 SENP2Q9HC62 589 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 EPHB3P54753 998 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ACOX1Q15067 660 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 TMEM63BQ5T3F8 832 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 MARC1Q5VT66 337 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 FAM220AQ7Z4H9 259 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 METTL6Q8TCB7 284 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF483Q8TF39 744 aaPredicted RBP12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF512BQ96KM6 892 aaPredicted RBP12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CRYL1Q9Y2S2 319 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CNTNAP2Q9UHC6 1331 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ICAM1P05362 532 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CCR1P32246 355 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 PLK1P53350 603 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CYP4F2P78329 520 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CYP4F3Q08477 520 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 BST2Q10589 180 aaKnown RBP12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CDH17Q12864 832 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 NR1D2Q14995 579 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 TTC27Q6P3X3 843 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF571Q7Z3V5 609 aaPredicted RBP12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ARHGEF19Q8IW93 802 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 TBL1YQ9BQ87 522 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CIPCQ9C0C6 399 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CLN6Q9NWW5 311 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 TAF6LQ9Y6J9 622 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 PRG2P13727 222 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms