RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 FAM182AQ5T1J6 154 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 GPR158Q5T848 1215 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 ANKRD20A1Q5TYW2 823 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 ANKRD20A3Q5VUR7 823 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 HOOK3Q86VS8 718 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 CIR1Q86X95 450 aaPredicted RBP24.5■■□□□ 1.51
SNX3-203ENST00000368979 PPIL6Q8IXY8 311 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 CCDC13Q8IYE1 715 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 NAT8LQ8N9F0 302 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 TSEN2Q8NCE0 465 aaKnown RBP24.5■■□□□ 1.51
SNX3-203ENST00000368979 VN1R2Q8NFZ6 395 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 DEPDC1BQ8WUY9 529 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 PRCCQ92733 491 aaPredicted RBP24.5■■□□□ 1.51
SNX3-203ENST00000368979 MRPL38Q96DV4 380 aaKnown RBP24.5■■□□□ 1.51
SNX3-203ENST00000368979 DDX50Q9BQ39 737 aaKnown RBP24.5■■□□□ 1.51
SNX3-203ENST00000368979 RFXAPO00287 272 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 MTSS1O43312 755 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 STK10O94804 968 aaKnown RBP24.49■■□□□ 1.51
SNX3-203ENST00000368979 CHKAP35790 457 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 NTHL1P78549 312 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 ARHGAP15Q53QZ3 475 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 RABGAP1LQ5R372 815 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 GRASPQ7Z6J2 395 aaPredicted RBP24.49■■□□□ 1.51
SNX3-203ENST00000368979 LRRC49Q8IUZ0 686 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 FAM217AQ8IXS0 508 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 ZCCHC9Q8N567 271 aaKnown RBP24.49■■□□□ 1.51
SNX3-203ENST00000368979 ATPAF2Q8N5M1 289 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 FOXP3Q9BZS1 431 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 TASP1Q9H6P5 420 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 ARHGAP26Q9UNA1 814 aa24.49■■□□□ 1.51
SNX3-203ENST00000368979 ZFP37Q9Y6Q3 630 aaPredicted RBP24.49■■□□□ 1.51
SNX3-203ENST00000368979 SPDYE4A6NLX3 237 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 SMAPO00193 183 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 OPHN1O60890 802 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 CCNCP24863 283 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 PTPN3P26045 913 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 BASP1P80723 227 aaKnown RBP24.48■■□□□ 1.51
SNX3-203ENST00000368979 DHX9Q08211 1270 aaKnown RBP24.48■■□□□ 1.51
SNX3-203ENST00000368979 ANKRD22Q5VYY1 191 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 ARHGAP36Q6ZRI8 547 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 HTR3DQ70Z44 454 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 TAB3Q8N5C8 712 aaPredicted RBP24.48■■□□□ 1.51
SNX3-203ENST00000368979 VIPAS39Q9H9C1 493 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 RAB6BQ9NRW1 208 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 LSM7Q9UK45 103 aaKnown RBP24.48■■□□□ 1.51
SNX3-203ENST00000368979 HPCAL4Q9UM19 191 aa24.48■■□□□ 1.51
SNX3-203ENST00000368979 KCNK1O00180 336 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 GFRA2O00451 464 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 MAFKO60675 156 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 SGSHP51688 502 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 CDH4P55283 916 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 KCNJ11Q14654 390 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 ARHGEF18Q6ZSZ5 1173 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 CMTM8Q8IZV2 173 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 ZNF567Q8N184 647 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 CFAP52Q8N1V2 620 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 ZSCAN18Q8TBC5 510 aaPredicted RBP24.47■■□□□ 1.51
SNX3-203ENST00000368979 TSPYL1Q9H0U9 437 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 PRO3102Q9H379 93 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 SFXN1Q9H9B4 322 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 SEPT10Q9P0V9 454 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 CFAP97Q9P2B7 532 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 CEP290O15078 2479 aa24.47■■□□□ 1.51
SNX3-203ENST00000368979 RASA4BC9J798 803 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 CHADO15335 359 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 RASA4O43374 803 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 TMEM63AO94886 807 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 METTL18O95568 372 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 MAGEA6P43360 314 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 PAPOLAP51003 745 aaKnown RBP24.46■■□□□ 1.51
SNX3-203ENST00000368979 RPS24P62847 133 aaKnown RBP24.46■■□□□ 1.51
SNX3-203ENST00000368979 SLMAPQ14BN4 828 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 TTC39BQ5VTQ0 682 aaPredicted RBP24.46■■□□□ 1.51
SNX3-203ENST00000368979 CHST9Q7L1S5 443 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 SMG7Q92540 1137 aaKnown RBP24.46■■□□□ 1.51
SNX3-203ENST00000368979 VAT1Q99536 393 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 CEP41Q9BYV8 373 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 ETNK1Q9HBU6 452 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 ZMYM5Q9UJ78 669 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 ZNF510Q9Y2H8 683 aa24.46■■□□□ 1.51
SNX3-203ENST00000368979 TCRBV7S3A2A0A539 114 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 LEFTY2O00292 366 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 ZNF197O14709 1029 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 TRDMT1O14717 391 aaKnown RBP24.45■■□□□ 1.51
SNX3-203ENST00000368979 OR1E1P30953 314 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 YBEYP58557 167 aaPredicted RBP24.45■■□□□ 1.51
SNX3-203ENST00000368979 ZBTB17Q13105 803 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 SPDYCQ5MJ68 293 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 C12orf76Q8N812 135 aaPredicted RBP24.45■■□□□ 1.51
SNX3-203ENST00000368979 HMCESQ96FZ2 354 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 PWWP2AQ96N64 755 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 DZANK1Q9NVP4 752 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 ATP8A1Q9Y2Q0 1164 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 SH3BP1Q9Y3L3 701 aa24.45■■□□□ 1.51
SNX3-203ENST00000368979 ARHGAP42A6NI28 874 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 RAMP2O60895 175 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 CLDN11O75508 207 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 FDFT1P37268 417 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 AVPR1AP37288 418 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 IFI35P80217 286 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms