RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SLC13A5Q86YT5 568 aaPredicted RBP10.32□□□□□ -0.76
TPM3-210ENST00000368530 ETFBKMTQ8IXQ9 262 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 CRYBG2Q8N1P7 616 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 B3GALNT2Q8NCR0 500 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 IFT81Q8WYA0 676 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 WBP2Q969T9 261 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 ZBTB9Q96C00 473 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 PIWIL1Q96J94 861 aaKnown RBP10.32□□□□□ -0.76
TPM3-210ENST00000368530 TNIP3Q96KP6 325 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 MED10Q9BTT4 135 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 B3GNT5Q9BYG0 378 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 DNAI2Q9GZS0 605 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 MIS12Q9H081 205 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 CD248Q9HCU0 757 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 ZDHHC4Q9NPG8 344 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 SMPD4Q9NXE4 827 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 IL37Q9NZH6 218 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 CFAP97Q9P2B7 532 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 WDR35Q9P2L0 1181 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 AMACRQ9UHK6 382 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 NUP205Q92621 2012 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 CLDN5O00501 218 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 SART1O43290 800 aaKnown RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 PSTPIP1O43586 416 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 KLF8O95600 359 aaPredicted RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 KRT1P04264 644 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 TUBBP07437 444 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 SETSIPP0DME0 302 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 LCP1P13796 627 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 GRIA2P42262 883 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 TNFRSF4P43489 277 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 TNNT3P45378 269 aaPredicted RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 DHPSP49366 369 aaPredicted RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 BST2Q10589 180 aaKnown RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 FOXC1Q12948 553 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 PIGHQ14442 188 aaPredicted RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 HSF5Q4G112 596 aaPredicted RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 PKDCCQ504Y2 493 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 LY6G5CQ5SRR4 150 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 BEND6Q5SZJ8 279 aaPredicted RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 SNX30Q5VWJ9 437 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 PEAR1Q5VY43 1037 aaPredicted RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 TXNRD3NBQ6F5E7 133 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 CCNI2Q6ZMN8 369 aaPredicted RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 PIP4P1Q86T03 277 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 TMEFF1Q8IYR6 380 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 PIGKQ92643 395 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 GDAP1L1Q96MZ0 367 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 SCNM1Q9BWG6 230 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 HEMGNQ9BXL5 484 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 ZWILCHQ9H900 591 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 EPB41L5Q9HCM4 733 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 WDFY3Q8IZQ1 3526 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 HELZP42694 1942 aaKnown RBP10.31□□□□□ -0.76
TPM3-210ENST00000368530 ZFYVE26Q68DK2 2539 aa10.31□□□□□ -0.76
TPM3-210ENST00000368530 CACNA1GO43497 2377 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 E2F8A0AVK6 867 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 FAM92AA1XBS5 289 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 SLC9A3R1O14745 358 aaPredicted RBP10.3□□□□□ -0.76
TPM3-210ENST00000368530 TTI1O43156 1089 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 COCHO43405 550 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 GREM1O60565 184 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 ZRANB2O95218 330 aaKnown RBP eCLIP10.3□□□□□ -0.76
TPM3-210ENST00000368530 ZDHHC11BP0C7U3 371 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 RARAP10276 462 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 PGFP49763 221 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 BCAT1P54687 386 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 GSCP56915 257 aaPredicted RBP10.3□□□□□ -0.76
TPM3-210ENST00000368530 TAF5Q15542 800 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 TRADDQ15628 312 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 TRIM61Q5EBN2 209 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 SPDYCQ5MJ68 293 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 SLC23A3Q6PIS1 610 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 SYT12Q8IV01 421 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 SCUBE3Q8IX30 993 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 KATNAL2Q8IYT4 538 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 PRELID2Q8N945 189 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 ANKRD52Q8NB46 1076 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 DEFB124Q8NES8 71 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 SLC35F5Q8WV83 523 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 UBE2Q2Q8WVN8 375 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 HNRNPLLQ8WVV9 542 aaKnown RBP10.3□□□□□ -0.76
TPM3-210ENST00000368530 C1orf54Q8WWF1 131 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 CASKIN2Q8WXE0 1202 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 MAGOHBQ96A72 148 aaKnown RBP10.3□□□□□ -0.76
TPM3-210ENST00000368530 KCNK16Q96T55 309 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 HERPUD2Q9BSE4 406 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 TRIM51Q9BSJ1 452 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 SLC4A5Q9BY07 1137 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 ADAM33Q9BZ11 813 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 PILRBQ9UKJ0 227 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 FAM208BQ5VWN6 2430 aa10.3□□□□□ -0.76
TPM3-210ENST00000368530 DMXL2Q8TDJ6 3036 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 THADAQ6YHU6 1953 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 UPK3BL1B0FP48 263 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 UPK3BL2E5RIL1 263 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 TRIM24O15164 1050 aa10.29□□□□□ -0.76
TPM3-210ENST00000368530 PAPSS1O43252 624 aaPredicted RBP10.29□□□□□ -0.76
TPM3-210ENST00000368530 PHF2O75151 1096 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms