RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 NIPA2Q8N8Q9 360 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 TTC17Q96AE7 1141 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 MYO19Q96H55 970 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 PHOX2BQ99453 314 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 CD248Q9HCU0 757 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 RRAGDQ9NQL2 400 aaPredicted RBP15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 NDFIP2Q9NV92 336 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 UVRAGQ9P2Y5 699 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 IP6K2Q9UHH9 426 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 USP18Q9UMW8 372 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 MYO15AQ9UKN7 3530 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 PRPSAP2O60256 369 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 DLDP09622 509 aaKnown RBP15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 HLA-EP13747 358 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 L1CAMP32004 1257 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 AIF1P55008 147 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 PIGHQ14442 188 aaPredicted RBP15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 RNF219Q5W0B1 726 aaPredicted RBP15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 TXNRD3NBQ6F5E7 133 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 NLRP14Q86W24 1093 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 CCDC170Q8IYT3 715 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 TSTD1Q8NFU3 115 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 SLC35G2Q8TBE7 412 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 TBC1D31Q96DN5 1066 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 MRGPRX3Q96LB0 322 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 KCTD15Q96SI1 283 aaPredicted RBP15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 DHX35Q9H5Z1 703 aaKnown RBP15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 OR51B4Q9Y5P0 310 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 CHD5Q8TDI0 1954 aa15.5■□□□□ 0.07
SMPDL3A-201ENST00000368440 DMDP11532 3685 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 MYO1FO00160 1098 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 TIMM44O43615 452 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 CREB3O43889 395 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 RHOCP08134 193 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 PCK1P35558 622 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 CYLC1P35663 651 aaPredicted RBP15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 MAGEA1P43355 309 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 CCZ1BP86790 482 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 CCZ1P86791 482 aaPredicted RBP15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 ACAP1Q15027 740 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 SMTNL2Q2TAL5 461 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 FNDC3BQ53EP0 1204 aaKnown RBP15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 KCNT1Q5JUK3 1230 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 ERMARDQ5T6L9 678 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 ANO7Q6IWH7 933 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 TMTC1Q8IUR5 882 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 ZBTB44Q8NCP5 570 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 MDGA1Q8NFP4 955 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 FEM1AQ9BSK4 669 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 ZWILCHQ9H900 591 aa15.49■□□□□ 0.07
SMPDL3A-201ENST00000368440 A0A0D9SEW6 157 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 TCRBV21S2A2A0A5A6 115 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 NDUFA10O95299 355 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 APBB3O95704 486 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 ATP5BP06576 529 aaKnown RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 OR1E1P30953 314 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 STK19P49842 368 aaPredicted RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 DGKEP52429 567 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 PLK1P53350 603 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 SLC25A11Q02978 314 aaKnown RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 SRSF5Q13243 272 aaKnown RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 SLC12A1Q13621 1099 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 SDE2Q6IQ49 451 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 SERPINA13PQ6UXR4 307 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 CAMKK1Q8N5S9 505 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 OR7D4Q8NG98 312 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 RPL10LQ96L21 214 aaKnown RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 PSMB7Q99436 277 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 BAG1Q99933 345 aaPredicted RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 TPSD1Q9BZJ3 242 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 MUC3BQ9H195 1237 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 SLC6A17Q9H1V8 727 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 TMEM245Q9H330 911 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 MTG2Q9H4K7 406 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 ZSCAN32Q9NX65 697 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 INTUQ9ULD6 942 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 ERVW-1Q9UQF0 538 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 REXO2Q9Y3B8 237 aaKnown RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 ARIH1Q9Y4X5 557 aaPredicted RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 PCDHA13Q9Y5I0 950 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 EPN1Q9Y6I3 576 aaPredicted RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 TMEM110-MUSTN1A8MSY1 372 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 EIF3CLB5ME19 914 aaKnown RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 PROSCO94903 275 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 MOCS3O95396 460 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 RHOQP17081 205 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 EPHB2P29323 1055 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 HOXA6P31267 233 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 SETD3Q86TU7 594 aaPredicted RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 RASSF3Q86WH2 238 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 HMGB4Q8WW32 186 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 RFFLQ8WZ73 363 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 EIF3CQ99613 913 aaKnown RBP15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 EPAS1Q99814 870 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 TMEM248Q9NWD8 314 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 DNAI1Q9UI46 699 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 VPS28Q9UK41 221 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 PLA2G4CQ9UP65 541 aa15.48■□□□□ 0.07
SMPDL3A-201ENST00000368440 RCCD1A6NED2 376 aa15.47■□□□□ 0.07
SMPDL3A-201ENST00000368440 NPC1O15118 1278 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms