RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 HMGXB4Q9UGU5 601 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 CAB39Q9Y376 341 aaPredicted RBP8.6□□□□□ -1.03
CD46-209ENST00000367047 MROH5Q6ZUA9 1318 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 RNF103-CHMP3A0A140T963 221 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 TRIM64BA6NI03 449 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 NEMP1O14524 444 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 B4GAT1O43505 415 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 FKBP9O95302 570 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 P4HBP07237 508 aaKnown RBP8.6□□□□□ -1.03
CD46-209ENST00000367047 MLLT3P42568 568 aaPredicted RBP8.6□□□□□ -1.03
CD46-209ENST00000367047 GYG1P46976 350 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 NRLP54845 237 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 PPP3CAQ08209 521 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 TAF5Q15542 800 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 FAM214AQ32MH5 1076 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 LGSNQ5TDP6 509 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 FKBP9P1Q75LS8 142 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 FAM71AQ8IYT1 594 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 CCDC24Q8N4L8 307 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 CBR4Q8N4T8 237 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 PDPRQ8NCN5 879 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 PSMA8Q8TAA3 256 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 RMDN1Q96DB5 314 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 MAGED4Q96JG8 741 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 DCAF5Q96JK2 942 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 MBOAT7Q96N66 472 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 ADI1Q9BV57 179 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 OR2B2Q9GZK3 357 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 MIR1-1HGQ9H1L0 117 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 COG4Q9H9E3 785 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 PCDH9Q9HC56 1237 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 RAB20Q9NX57 234 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 ABI2Q9NYB9 513 aaPredicted RBP8.6□□□□□ -1.03
CD46-209ENST00000367047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.6□□□□□ -1.03
CD46-209ENST00000367047 GMIPQ9P107 970 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 FARP1Q9Y4F1 1045 aaPredicted RBP8.6□□□□□ -1.03
CD46-209ENST00000367047 NRXN3Q9Y4C0 1643 aa8.6□□□□□ -1.03
CD46-209ENST00000367047 BAZ2AQ9UIF9 1905 aaKnown RBP8.59□□□□□ -1.03
CD46-209ENST00000367047 ZBBXA8MT70 800 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 ACOT8O14734 319 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 RAD51BO15315 384 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 DAB1O75553 588 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 PROSCO94903 275 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 FAM13AO94988 1023 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 KRT1P04264 644 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 TCF4P15884 667 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 PIK3R1P27986 724 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 LTKP29376 864 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 SLC9B1Q4ZJI4 515 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 BOLA3Q53S33 107 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 HYIQ5T013 277 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 TRAF7Q6Q0C0 670 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 ARCQ7LC44 396 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 PCGF5Q86SE9 256 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 SLCO6A1Q86UG4 719 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 CCDC103Q8IW40 242 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 ZNF444Q8N0Y2 327 aaPredicted RBP8.59□□□□□ -1.03
CD46-209ENST00000367047 OR2T3Q8NH03 318 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 ANGPTL6Q8NI99 470 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 ACMSDQ8TDX5 336 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 TRIB2Q92519 343 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 DHX38Q92620 1227 aaKnown RBP8.59□□□□□ -1.03
CD46-209ENST00000367047 ZNF560Q96MR9 790 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 KREMEN1Q96MU8 473 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 YME1L1Q96TA2 773 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 MUC3BQ9H195 1237 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 RNPEPQ9H4A4 650 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 TBC1D22BQ9NU19 505 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 COQ3Q9NZJ6 369 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 TCAF1Q9Y4C2 921 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 ZNF142P52746 1687 aaPredicted RBP8.59□□□□□ -1.03
CD46-209ENST00000367047 NFASCO94856 1347 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 RGPD2P0DJD1 1756 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 ROBO3Q96MS0 1386 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 UBR1Q8IWV7 1749 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 RGSL1A5PLK6 1076 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 WTIPA6NIX2 430 aaPredicted RBP8.59□□□□□ -1.03
CD46-209ENST00000367047 B8ZZF3 427 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 MYL4P12829 197 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 CTRB1P17538 263 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 POLR2CP19387 275 aaPredicted RBP8.59□□□□□ -1.03
CD46-209ENST00000367047 RFX1P22670 979 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 CASP3P42574 277 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 ACOT2P49753 483 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 GTF2IP78347 998 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 NIPAL4Q0D2K0 466 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 GRSF1Q12849 480 aaKnown RBP eCLIP8.59□□□□□ -1.03
CD46-209ENST00000367047 TUBA3CQ13748 450 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 CTRB2Q6GPI1 263 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 CRTC3Q6UUV7 619 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 GALNT7Q86SF2 657 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 NAT8LQ8N9F0 302 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 TMEM35BQ8NCS4 154 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 OR13F1Q8NGS4 319 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 RAB2BQ8WUD1 216 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 HDAC2Q92769 488 aaKnown RBP8.59□□□□□ -1.03
CD46-209ENST00000367047 SLC10A4Q96EP9 437 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 PSKH2Q96QS6 385 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 OR52B2Q96RD2 323 aa8.59□□□□□ -1.03
CD46-209ENST00000367047 SOX17Q9H6I2 414 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms