RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SEMA5AQ13591 1074 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 SNX31Q8N9S9 440 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 APBB2Q92870 758 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 TMA16Q96EY4 203 aaKnown RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 IGKV6D-21A0A0A0MT36 114 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 ZBTB42B2RXF5 422 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 PPEF2O14830 753 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 ARIH2O95376 493 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 PIM1P11309 404 aaPredicted RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 LCP1P13796 627 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 LSM12Q3MHD2 195 aaKnown RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 IER5Q5VY09 327 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 NCBP2-AS2Q69YL0 99 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 STRA8Q7Z7C7 330 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 LCA5Q86VQ0 697 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 MARVELD2Q8N4S9 558 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 ZNF280CQ8ND82 737 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 OR52K1Q8NGK4 314 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 TMIGD2Q96BF3 282 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 ZNF669Q96BR6 464 aaPredicted RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 KLHL32Q96NJ5 620 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 ZNF670Q9BS34 389 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 GATA5Q9BWX5 397 aaPredicted RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 DNAAF2Q9NVR5 837 aaKnown RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 PTTG2Q9NZH5 202 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 STK39Q9UEW8 545 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 PCDHB12Q9Y5F1 795 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 ACKR2O00590 384 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 MX2P20592 715 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 RPL10P27635 214 aaKnown RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 SLC5A2P31639 672 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 XIAPP98170 497 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 HSP90AA5PQ58FG0 334 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 FSCBQ5H9T9 825 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 RARS2Q5T160 578 aaKnown RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 TSHZ1Q6ZSZ6 1077 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 SPATA6LQ8N4H0 392 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 CXorf38Q8TB03 319 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 QKIQ96PU8 341 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRKN-205ENST00000366897 MRPL45Q9BRJ2 306 aaKnown RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 SIKE1Q9BRV8 207 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 RTKNQ9BST9 563 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 STN1Q9H668 368 aaKnown RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 RIMS3Q9UJD0 308 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 TMCO1Q9UM00 188 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 BARX2Q9UMQ3 279 aaPredicted RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 FIS1Q9Y3D6 152 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 SNX9Q9Y5X1 595 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 A0A096LPK6 155 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 XPO1O14980 1071 aaKnown RBP13.88□□□□□ -0.19
PRKN-205ENST00000366897 ATP9BO43861 1147 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 ALDH1A2O94788 518 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 CDK4P11802 303 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 P4HA1P13674 534 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 PTPRAP18433 802 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 PROZP22891 400 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 PITX1P78337 314 aaPredicted RBP13.88□□□□□ -0.19
PRKN-205ENST00000366897 HPCAP84074 193 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 TMED1Q13445 227 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 ADGRE1Q14246 886 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 SOWAHAQ2M3V2 549 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 STEAP4Q687X5 459 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 FSTL4Q6MZW2 842 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 DLK2Q6UY11 383 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 BNC2Q6ZN30 1099 aaPredicted RBP13.88□□□□□ -0.19
PRKN-205ENST00000366897 ACMSDQ8TDX5 336 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 COPS5Q92905 334 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 NPAS2Q99743 824 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 SENP6Q9GZR1 1112 aaPredicted RBP13.88□□□□□ -0.19
PRKN-205ENST00000366897 CREBZFQ9NS37 354 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 GGA3Q9NZ52 723 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 BPTFQ12830 3046 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 A0A0A0MRY4 1105 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 TMEM233B4DJY2 109 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 G3V2L1 256 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 TMCC1O94876 653 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 ALOX15P16050 662 aaPredicted RBP13.88□□□□□ -0.19
PRKN-205ENST00000366897 CNTFP26441 200 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 AVPR1AP37288 418 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 COG7P83436 770 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 SLC6A3Q01959 620 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 SLC10A6Q3KNW5 377 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 LCLAT1Q6UWP7 414 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 KYQ8NBH2 561 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 CERS2Q96G23 380 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 P2RY11Q96G91 374 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 SPATA13Q96N96 652 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 NT5C1AQ9BXI3 368 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 SLC4A5Q9BY07 1137 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 RBM38Q9H0Z9 239 aaKnown RBP13.88□□□□□ -0.19
PRKN-205ENST00000366897 NME7Q9Y5B8 376 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 CDY2AQ9Y6F7 541 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 CDY1Q9Y6F8 540 aa13.88□□□□□ -0.19
PRKN-205ENST00000366897 PHGDHO43175 533 aaKnown RBP13.87□□□□□ -0.19
PRKN-205ENST00000366897 DENRO43583 198 aaKnown RBP13.87□□□□□ -0.19
PRKN-205ENST00000366897 TPH1P17752 444 aa13.87□□□□□ -0.19
PRKN-205ENST00000366897 PGAM1P18669 254 aa13.87□□□□□ -0.19
PRKN-205ENST00000366897 ADORA2BP29275 332 aa13.87□□□□□ -0.19
PRKN-205ENST00000366897 GP5P40197 560 aa13.87□□□□□ -0.19
PRKN-205ENST00000366897 ZNF423Q2M1K9 1284 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms