RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 ZCWPW1Q9H0M4 648 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 FBXO44Q9H4M3 255 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 CWH43Q9H720 699 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 NPDC1Q9NQX5 325 aaPredicted RBP11.17□□□□□ -0.62
H3F3A-202ENST00000366814 TMPRSS4Q9NRS4 437 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 ABI2Q9NYB9 513 aaPredicted RBP11.17□□□□□ -0.62
H3F3A-202ENST00000366814 HCSTQ9UBK5 93 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 PRG3Q9Y2Y8 225 aaPredicted RBP11.17□□□□□ -0.62
H3F3A-202ENST00000366814 MFHAS1Q9Y4C4 1052 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 PLXNA4Q9HCM2 1894 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 OR6C75A6NL08 312 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 ZWINTO95229 277 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 CREB1P16220 341 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 CA4P22748 312 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 EPHB2P29323 1055 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 CCR1P32246 355 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 ELAVL2Q12926 359 aaKnown RBP11.17□□□□□ -0.62
H3F3A-202ENST00000366814 SPARCL1Q14515 664 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 LRRC14Q15048 493 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 ITPRIPL1Q6GPH6 555 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 YTHDF3Q7Z739 585 aaKnown RBP11.17□□□□□ -0.62
H3F3A-202ENST00000366814 CAND1Q86VP6 1230 aaKnown RBP11.17□□□□□ -0.62
H3F3A-202ENST00000366814 CCNJLQ8IV13 435 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 LRRC43Q8N309 656 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 CCDC33Q8N5R6 958 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 POF1BQ8WVV4 589 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 CKAP2Q8WWK9 683 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 SEC16BQ96JE7 1060 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 DHRS4Q9BTZ2 278 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 MRPL9Q9BYD2 267 aaKnown RBP11.17□□□□□ -0.62
H3F3A-202ENST00000366814 OSBPL2Q9H1P3 480 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 KLHL8Q9P2G9 620 aaPredicted RBP11.17□□□□□ -0.62
H3F3A-202ENST00000366814 ADAM28Q9UKQ2 775 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 PCDHB5Q9Y5E4 795 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 MAD1L1Q9Y6D9 718 aa11.17□□□□□ -0.62
H3F3A-202ENST00000366814 A0A0C4DFX4 3053 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 FAM72CH0Y354 149 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 IRAK2O43187 625 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 AVILO75366 819 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 KRT37O76014 449 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 FGF18O76093 207 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 ALDH2P05091 517 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 MAGEA3P43357 314 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 PPIDQ08752 370 aaKnown RBP11.16□□□□□ -0.62
H3F3A-202ENST00000366814 MTM1Q13496 603 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 KBTBD12Q3ZCT8 623 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 CTXN3Q4LDR2 81 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 FAM72AQ5TYM5 149 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 FAM72DQ6L9T8 149 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 LRRC6Q86X45 466 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 FAM72BQ86X60 149 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 LRRC34Q8IZ02 419 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 NUP93Q8N1F7 819 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 OTUD6BQ8N6M0 293 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 SCAMP5Q8TAC9 235 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 GSDMBQ8TAX9 411 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 GDAP1Q8TB36 358 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 SLC44A1Q8WWI5 657 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 HDAC11Q96DB2 347 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 C8orf48Q96LL4 319 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 ZNF558Q96NG5 402 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 SERPINB11Q96P15 392 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 HAPLN3Q96S86 360 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 VAT1Q99536 393 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 EBNA1BP2Q99848 306 aaKnown RBP11.16□□□□□ -0.62
H3F3A-202ENST00000366814 PAIP2Q9BPZ3 127 aaKnown RBP11.16□□□□□ -0.62
H3F3A-202ENST00000366814 WDR83Q9BRX9 315 aaKnown RBP11.16□□□□□ -0.62
H3F3A-202ENST00000366814 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 SMOC2Q9H3U7 446 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 IGFLR1Q9H665 355 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 CATSPERBQ9H7T0 1116 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 IGSF9Q9P2J2 1179 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 TRHDEQ9UKU6 1024 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 UNC80Q8N2C7 3258 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 MYO16Q9Y6X6 1858 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 ATG2AQ2TAZ0 1938 aa11.16□□□□□ -0.62
H3F3A-202ENST00000366814 TCP11X1B4DZS4 312 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 F8W810 466 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 FGF10O15520 208 aaPredicted RBP11.15□□□□□ -0.62
H3F3A-202ENST00000366814 SPAG7O75391 227 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 IGLV3-25P01717 112 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 APOEP02649 317 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 MT-ND3P03897 115 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 SLC2A3P11169 496 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 DNAJB1P25685 340 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 MAGEA11P43364 429 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 ALDH7A1P49419 539 aaKnown RBP11.15□□□□□ -0.62
H3F3A-202ENST00000366814 KCNQ1P51787 676 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 ZNF33AQ06730 810 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 SMARCB1Q12824 385 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 ITIH4Q14624 930 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 EFTUD2Q15029 972 aaKnown RBP eCLIP11.15□□□□□ -0.621e-8■■□□□ 12.9
H3F3A-202ENST00000366814 VARS2Q5ST30 1063 aaKnown RBP11.15□□□□□ -0.62
H3F3A-202ENST00000366814 TTC39BQ5VTQ0 682 aaPredicted RBP11.15□□□□□ -0.62
H3F3A-202ENST00000366814 HHATQ5VTY9 493 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 NUGGCQ68CJ6 796 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 LRRC8BQ6P9F7 803 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 CCDC121Q6ZUS5 278 aa11.15□□□□□ -0.62
H3F3A-202ENST00000366814 PID1Q7Z2X4 250 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms