RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CCDC154A6NI56 674 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 EML1O00423 815 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 CABYRO75952 493 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 IQCKQ8N0W5 287 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 KLHL28Q9NXS3 571 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 USE1Q9NZ43 259 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 FAM220BPB1ANY3 271 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 FSCN2O14926 492 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 BCL10O95999 233 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 IMPDH2P12268 514 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 NEK3P51956 506 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 RHBDL3P58872 404 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 RHOAP61586 193 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 IRF2BP2Q7Z5L9 587 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 ADCK2Q7Z695 626 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 ATL1Q8WXF7 558 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 ACSF2Q96CM8 615 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 ETNK2Q9NVF9 386 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 DDX43Q9NXZ2 648 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 WDR27A2RRH5 827 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 DYRK3O43781 588 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 CHI3L1P36222 383 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 TTPAP49638 278 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 GLRA4Q5JXX5 417 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 FAM120BQ96EK7 910 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 POU6F1Q14863 301 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 PTCH2Q9Y6C5 1203 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 CKMP06732 381 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 TSNQ15631 228 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 SMAD1Q15797 465 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 TBCELQ5QJ74 424 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 IYDQ6PHW0 289 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 OTOAQ7RTW8 1153 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZDHHC13Q8IUH4 622 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 VPS45Q9NRW7 570 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 LAMA4Q16363 1823 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 EFEMP1Q12805 493 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 TTMPQ5BVD1 217 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 FAM126BQ8IXS8 530 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 PTCD3Q96EY7 689 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 C1orf50Q9BV19 199 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 OSBPL6Q9BZF3 934 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 SHOX2O60902 331 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 PDE5AO76074 875 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 SSTR1P30872 391 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 TRIP4Q15650 581 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZNF572Q7Z3I7 529 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 CERS2Q96G23 380 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 RP1L1Q8IWN7 2480 aaPredicted RBP12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 PDE2AO00408 941 aaPredicted RBP12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 TRIM24O15164 1050 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 RGS14O43566 566 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 PIK3R1P27986 724 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 SOAT1P35610 550 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 PPP3CAQ08209 521 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 TOP3AQ13472 1001 aaPredicted RBP12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 OLFML2BQ68BL8 750 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 C12orf50Q8NA57 414 aaPredicted RBP12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 ANKRD52Q8NB46 1076 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 TNFRSF25Q93038 417 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 LACTBL1A8MY62 500 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 PMM2O15305 246 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 TRUB2O95900 331 aaKnown RBP12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 CCDC85BQ15834 202 aaPredicted RBP12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 FAM187BQ17R55 369 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 RFX4Q33E94 735 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 SGO1Q5FBB7 561 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZFP42Q96MM3 310 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 GNG14A0A1W2PPG7 69 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 MANSC4A6NHS7 340 aaPredicted RBP12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 BAIAP3O94812 1187 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 GUCA1CO95843 209 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 GLRBP48167 497 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 HUNKP57058 714 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 IL2P60568 153 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 GNA13Q14344 377 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 POTEHQ6S545 545 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 HMG20AQ9NP66 347 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 SPATA31C2B4DYI2 1134 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 TK2O00142 265 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 ATP9AO75110 1047 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 VTNP04004 478 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 MAP3K7CLP57077 242 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 CSHL1Q14406 222 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 AMHR2Q16671 573 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 SWT1Q5T5J6 900 aaKnown RBP12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 SGF29Q96ES7 293 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 TMEM237Q96Q45 408 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 SPAG4Q9NPE6 437 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 MIEF1Q9NQG6 463 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 CDH9Q9ULB4 789 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 H7C0S8 307 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 GUCY1B2O75343 617 aa12.24□□□□□ -0.45
CDC42BPA-203ENST00000366766 HMBSP08397 361 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms