RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 PKP3Q9Y446 797 aa3.56□□□□□ -1.84
RNU4-48P-201ENST00000365559 TMEM272A0A1B0GTI8 110 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 TCRBV7S3A2A0A539 114 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 NPIPB13A6NJU9 1138 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 NPIPB5A8MRT5 1133 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 FOXO6A8MYZ6 492 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 KCNJ18B7U540 433 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 NPIPB4C9JG80 1138 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 FAM155BO75949 473 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 NEURL1O76050 574 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 NDUFB8O95169 186 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 EPN2O95208 641 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 CHN1P15882 459 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 PCP4P48539 62 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 KRTAP10-11P60412 298 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 GALNT3Q14435 633 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 INPP5JQ15735 1006 aaPredicted RBP3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 PDCD2Q16342 344 aaPredicted RBP3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 GRAMD1BQ3KR37 738 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 ODF3L2Q3SX64 289 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 ZNF260Q3ZCT1 412 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 C6orf10Q5SRN2 563 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 HMBOX1Q6NT76 420 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 MTFR2Q6P444 385 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 SLC30A9Q6PML9 568 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 COLCA1Q6ZS62 124 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 CYB5R4Q7L1T6 521 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 ANKS1BQ7Z6G8 1248 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 KLBQ86Z14 1044 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 SUGP1Q8IWZ8 645 aaKnown RBP3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 GALNT15Q8N3T1 639 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 ENDOVQ8N8Q3 282 aaKnown RBP3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 OR6Y1Q8NGX8 325 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 RUBCNQ92622 972 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 KCNJ9Q92806 393 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 RILPL2Q969X0 211 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 CLMNQ96JQ2 1002 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 WDR83Q9BRX9 315 aaKnown RBP3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 PAGR1Q9BTK6 254 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 HERC2P3Q9BVR0 1158 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 FRMD8Q9BZ67 464 aaPredicted RBP3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 CLPBQ9H078 707 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 ZNF304Q9HCX3 659 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 G6PC2Q9NQR9 355 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 SLC22A11Q9NSA0 550 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 ARL15Q9NXU5 204 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 BAG5Q9UL15 447 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 TNFSF13BQ9Y275 285 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 CACNA1IQ9P0X4 2223 aa3.55□□□□□ -1.84
RNU4-48P-201ENST00000365559 IGLV5-39A0A0G2JS06 123 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 H3BNX3 289 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 HNRNPRO43390 633 aaKnown RBP3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 TULP3O75386 442 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 ACP5P13686 325 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 HOXB9P17482 250 aaPredicted RBP3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 ADD2P35612 726 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 GRK6P43250 576 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 LINC00205P59089 165 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 RHAGQ02094 409 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 GAD2Q05329 585 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 PRKG1Q13976 671 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 SEMA3AQ14563 771 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 TWIST1Q15672 202 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 SMAD1Q15797 465 aaKnown RBP3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 GPR162Q16538 588 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 EPHA10Q5JZY3 1008 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 TTC39AQ5SRH9 613 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 MANEAQ5SRI9 462 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 ANO1Q5XXA6 986 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 RNF144BQ7Z419 303 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 MOGAT3Q86VF5 341 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 GPSM1Q86YR5 675 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 VPS52Q8N1B4 723 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 NKAPQ8N5F7 415 aaKnown RBP3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 TMEM217Q8N7C4 229 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 ZNF366Q8N895 744 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 PTGR2Q8N8N7 351 aaPredicted RBP3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 C2CD4CQ8TF44 421 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 GOLGA1Q92805 767 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 SLC25A28Q96A46 364 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 TRIM31Q9BZY9 425 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 TWSG1Q9GZX9 223 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 MYLK2Q9H1R3 596 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 RMI1Q9H9A7 625 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 PLEKHA2Q9HB19 425 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 SAYSD1Q9NPB0 183 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 DECR2Q9NUI1 292 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 TMEM248Q9NWD8 314 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 SQORQ9Y6N5 450 aa3.54□□□□□ -1.84
RNU4-48P-201ENST00000365559 TTC3P53804 2025 aa3.53□□□□□ -1.84
RNU4-48P-201ENST00000365559 B9A039 149 aa3.53□□□□□ -1.84
RNU4-48P-201ENST00000365559 CSF1P09603 554 aa3.53□□□□□ -1.84
RNU4-48P-201ENST00000365559 PKMP14618 531 aaKnown RBP3.53□□□□□ -1.84
RNU4-48P-201ENST00000365559 TYK2P29597 1187 aa3.53□□□□□ -1.84
RNU4-48P-201ENST00000365559 AVPR2P30518 371 aa3.53□□□□□ -1.84
RNU4-48P-201ENST00000365559 ALDH7A1P49419 539 aaKnown RBP3.53□□□□□ -1.84
RNU4-48P-201ENST00000365559 PMPCAQ10713 525 aa3.53□□□□□ -1.84
RNU4-48P-201ENST00000365559 ALKBH1Q13686 389 aaKnown RBP3.53□□□□□ -1.84
RNU4-48P-201ENST00000365559 TAF5Q15542 800 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms