RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CENPUQ71F23 418 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CDR2LQ86X02 465 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 ZBED8Q8IZ13 594 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 AHI1Q8N157 1196 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CACTIN-AS1Q8N1I8 211 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 ACTL9Q8TC94 416 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CPT1BQ92523 772 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 ZBTB10Q96DT7 871 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 MCRS1Q96EZ8 462 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 NLRP4Q96MN2 994 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 TWNKQ96RR1 684 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 INO80BQ9C086 356 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 RPF1Q9H9Y2 349 aaKnown RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 ARL2BPQ9Y2Y0 163 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 LACTBL1A8MY62 500 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 E7ESA3 106 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 GOLGA8SH3BPF8 625 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CST8O60676 142 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 C22orf31O95567 290 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CD48P09326 243 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 GPD2P43304 727 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 PSMC4P43686 418 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CLCN3P51790 818 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 MGAT5Q09328 741 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 MOGSQ13724 837 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 ACAP1Q15027 740 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 HADHQ16836 314 aaKnown RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 SMTNL2Q2TAL5 461 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 KCNT1Q5JUK3 1230 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 RNF43Q68DV7 783 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 OSTM1Q86WC4 334 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CRIPAKQ8N1N5 446 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 LINC01465Q8N7H1 131 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 GBP7Q8N8V2 638 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 C1orf162Q8NEQ5 155 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 COPS5Q92905 334 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 GRAMD1AQ96CP6 724 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 Q96M66 194 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 FCRL3Q96P31 734 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 PLCD4Q9BRC7 762 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 FOXQ1Q9C009 403 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 ELOVL4Q9GZR5 314 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 ZWILCHQ9H900 591 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 SENP1Q9P0U3 644 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 HMGXB4Q9UGU5 601 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 SLC24A2Q9UI40 661 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CLUHO75153 1309 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 DICER1Q9UPY3 1922 aaKnown RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 DNAH12Q6ZR08 3092 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 CFAP73A6NFT4 308 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 CXCL11O14625 94 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 TYROBPO43914 113 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 ENDOD1O94919 500 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 CD19P15391 556 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 ATICP31939 592 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 CTCFP49711 727 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 GTF2A1P52655 376 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 NCALDP61601 193 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 IL9RQ01113 521 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 GAD2Q05329 585 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 SOX4Q06945 474 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 MYO1EQ12965 1108 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 PDIA2Q13087 525 aaKnown RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 SNCBQ16143 134 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 PKN2Q16513 984 aaKnown RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 FAM133BQ5BKY9 247 aaKnown RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 HP1BP3Q5SSJ5 553 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 FNBP1LQ5T0N5 605 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 ANKRD22Q5VYY1 191 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 JADE1Q6IE81 842 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 FBXO16Q8IX29 292 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 FITM2Q8N6M3 262 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 TMEM176AQ96HP8 235 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 WDR83Q9BRX9 315 aaKnown RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 RNPEPQ9H4A4 650 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 TRABDQ9H4I3 376 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 SMYD3Q9H7B4 428 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 RXFP1Q9HBX9 757 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 CD248Q9HCU0 757 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 PRMT7Q9NVM4 692 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 AGTPBP1Q9UPW5 1226 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 TRUB2O95900 331 aaKnown RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 IFNB1P01574 187 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 CKMP06732 381 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 KRT19P08727 400 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 STAG3L1P0CL83 205 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 COL6A2P12110 1019 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 MIPP30301 263 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 RPL22P35268 128 aaKnown RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 ADCY1Q08828 1119 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 CCDC15Q0P6D6 951 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 FOXD4Q12950 439 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 ZC3H12BQ5HYM0 836 aaKnown RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 EMC1Q8N766 993 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 RCBTB1Q8NDN9 531 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 EDARADDQ8WWZ3 215 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 C10orf88Q9H8K7 445 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 KIF9Q9HAQ2 790 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 CYP3A43Q9HB55 503 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 GRID1Q9ULK0 1009 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms