RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 BAIAP3O94812 1187 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 ALDH7A1P49419 539 aaKnown RBP16.65■□□□□ 0.26
SCAF1-201ENST00000360565 RPL14P50914 215 aaKnown RBP16.65■□□□□ 0.26
SCAF1-201ENST00000360565 GDF10P55107 478 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 NFYCQ13952 458 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 SCARA3Q6AZY7 606 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 SLC39A4Q6P5W5 647 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 PACS1Q6VY07 963 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 SLC22A9Q8IVM8 553 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 DIS3LQ8TF46 1054 aaKnown RBP16.65■□□□□ 0.26
SCAF1-201ENST00000360565 SERPINB11Q96P15 392 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 SYBUQ9NX95 663 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 WWOXQ9NZC7 414 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 SLC13A4Q9UKG4 626 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 TMEM247A6NEH6 219 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 ATP5BP06576 529 aaKnown RBP16.65■□□□□ 0.26
SCAF1-201ENST00000360565 FCGRTP55899 365 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 TXNRD3NBQ6F5E7 133 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 ADGRD1Q6QNK2 874 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 PIGWQ7Z7B1 504 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 ACE2Q9BYF1 805 aaPredicted RBP16.65■□□□□ 0.26
SCAF1-201ENST00000360565 PRKAG2Q9UGJ0 569 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 SORCS3Q9UPU3 1222 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 CRYL1Q9Y2S2 319 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 TCF4P15884 667 aa16.64■□□□□ 0.26
SCAF1-201ENST00000360565 MRPS22P82650 360 aaKnown RBP16.64■□□□□ 0.26
SCAF1-201ENST00000360565 MRPS5P82675 430 aaKnown RBP16.64■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF280DQ6N043 979 aa16.64■□□□□ 0.26
SCAF1-201ENST00000360565 IRGCQ6NXR0 463 aa16.64■□□□□ 0.26
SCAF1-201ENST00000360565 VSTM1Q6UX27 236 aa16.64■□□□□ 0.26
SCAF1-201ENST00000360565 NDRG1Q92597 394 aaKnown RBP16.64■□□□□ 0.26
SCAF1-201ENST00000360565 BORCS6Q96GS4 357 aa16.64■□□□□ 0.26
SCAF1-201ENST00000360565 PHACTR1Q9C0D0 580 aa16.64■□□□□ 0.26
SCAF1-201ENST00000360565 PTPRHQ9HD43 1115 aa16.64■□□□□ 0.26
SCAF1-201ENST00000360565 MORF4L1Q9UBU8 362 aa16.64■□□□□ 0.26
SCAF1-201ENST00000360565 FKBP9O95302 570 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 CRTAMO95727 393 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 ALBP02768 609 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 AKR1A1P14550 325 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 DNAJB2P25686 324 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 FASTKQ14296 549 aaKnown RBP16.64■□□□□ 0.25
SCAF1-201ENST00000360565 WLSQ5T9L3 541 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 ISLR2Q6UXK2 745 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 FKBP9P1Q75LS8 142 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 EFCAB3Q8N7B9 438 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 PRDM16Q9HAZ2 1276 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 ENTPD7Q9NQZ7 604 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 PAPOLBQ9NRJ5 636 aaKnown RBP16.64■□□□□ 0.25
SCAF1-201ENST00000360565 APPL1Q9UKG1 709 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 EGFRP00533 1210 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 ZNF23P17027 643 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 RANBP1P43487 201 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 PRKAA2P54646 552 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 CYP2R1Q6VVX0 501 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 APLFQ8IW19 511 aaPredicted RBP16.64■□□□□ 0.25
SCAF1-201ENST00000360565 ZNF555Q8NEP9 628 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 ADAM2Q99965 735 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 LRMDAQ9H2I8 198 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 FBXO44Q9H4M3 255 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 PLLPQ9Y342 182 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 PRR5-ARHGAP8B1AHC4 643 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 ARHGAP8P85298 464 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 RIPOR1Q6ZS17 1223 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 FAM162AQ96A26 154 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 NMD3Q96D46 503 aaKnown RBP16.64■□□□□ 0.25
SCAF1-201ENST00000360565 OMDQ99983 421 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 PDZD7Q9H5P4 517 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 SH3BP1Q9Y3L3 701 aa16.64■□□□□ 0.25
SCAF1-201ENST00000360565 MYO1GB0I1T2 1018 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 FOXN2P32314 431 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 WDR4P57081 412 aaKnown RBP16.63■□□□□ 0.25
SCAF1-201ENST00000360565 SLC39A12Q504Y0 691 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 PCID2Q5JVF3 399 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 C9orf57Q5W0N0 161 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 DRICH1Q6PGQ1 229 aaPredicted RBP16.63■□□□□ 0.25
SCAF1-201ENST00000360565 LPPQ93052 612 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 POMKQ9H5K3 350 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 PIF1Q9H611 641 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 SNX15Q9NRS6 342 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 RABGEF1Q9UJ41 708 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 PCDHB5Q9Y5E4 795 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 TRPV2Q9Y5S1 764 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 NUP188Q5SRE5 1749 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 BUD23O43709 281 aaKnown RBP16.63■□□□□ 0.25
SCAF1-201ENST00000360565 BPGMP07738 259 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 RHOCP08134 193 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 ZNF135P52742 658 aaPredicted RBP16.63■□□□□ 0.25
SCAF1-201ENST00000360565 OASLQ15646 514 aaKnown RBP16.63■□□□□ 0.25
SCAF1-201ENST00000360565 C10orf107Q8IVU9 208 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 HS6ST3Q8IZP7 471 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 SNX31Q8N9S9 440 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 OR6Y1Q8NGX8 325 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 ZSCAN18Q8TBC5 510 aaPredicted RBP16.63■□□□□ 0.25
SCAF1-201ENST00000360565 IL1RAPL1Q9NZN1 696 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 NDUFA13Q9P0J0 144 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 ANKRD6Q9Y2G4 727 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 C16orf96A6NNT2 1141 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 MRASO14807 208 aa16.63■□□□□ 0.25
SCAF1-201ENST00000360565 USP2O75604 605 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms