RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 ACVR2BQ13705 512 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 ACAP1Q15027 740 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 SHROOM1Q2M3G4 852 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 APOBEC3HQ6NTF7 200 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 DHFR2Q86XF0 187 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 TRAPPC12Q8WVT3 735 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 TBCBQ99426 244 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 RIBC2Q9H4K1 309 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 KLHL3Q9UH77 587 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 CCDC154A6NI56 674 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 A8MX80 341 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 USP39Q53GS9 565 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 ILDR2Q71H61 639 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 PHACTR4Q8IZ21 702 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 FNDC5Q8NAU1 212 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 AENQ8WTP8 325 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 APBA2Q99767 749 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 TSEN34Q9BSV6 310 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 FHDC1Q9C0D6 1143 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 PCDH9Q9HC56 1237 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 DNPEPQ9ULA0 475 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 AGRPO00253 132 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 CYP7B1O75881 506 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 KLHL18O94889 574 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 KRT6AP02538 564 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 ZSCAN5DPP0CG00 497 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 FASP25445 335 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 GCNT1Q02742 428 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 FAM171A1Q5VUB5 890 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 MRPL9Q9BYD2 267 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 GDF3Q9NR23 364 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 CHKBQ9Y259 395 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 PDE9AO76083 593 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 ATG7O95352 703 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 TPBGLP0DKB5 382 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 ACADMP11310 421 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 NUP62P37198 522 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 AMPD2Q01433 879 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 DNAJC14Q6Y2X3 702 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 BRSK2Q8IWQ3 736 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 SCUBE3Q8IX30 993 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 ZNF75CPQ92670 426 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 OSGEPL1Q9H4B0 414 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 SH3BP4Q9P0V3 963 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 ADAM30Q9UKF2 790 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 RAD54BQ9Y620 910 aa12.43□□□□□ -0.42
CCDC144A-204ENST00000360524 PCP4L1A6NKN8 68 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 RAD51BO15315 384 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 AMHP03971 560 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 PGAM1P18669 254 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 FLT3P36888 993 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 CLK2P49760 499 aaKnown RBP12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 TRAF3Q13114 568 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 CNGA2Q16280 664 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 DDR2Q16832 855 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SPANXN2Q5MJ10 180 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SLC22A9Q8IVM8 553 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SPPL2AQ8TCT8 520 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 PYDC1Q8WXC3 89 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SERPINB11Q96P15 392 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 NDNQ99608 321 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 TUBGCP4Q9UGJ1 667 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 PNMA8CA0A1B0GUJ8 204 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SNTNA6NMZ2 147 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SLCO1B7G3V0H7 640 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 RAMP2O60895 175 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 CBFA2T3O75081 653 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 PAEPP09466 180 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 ABCG1P45844 678 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 PLK1P53350 603 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 PKNOX1P55347 436 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 FAM98BQ52LJ0 330 aaKnown RBP12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 TTMPQ5BVD1 217 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 RETSATQ6NUM9 610 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 C16orf46Q6P387 395 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 APBB2Q92870 758 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 VPS33AQ96AX1 596 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SERAC1Q96JX3 654 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 RNF145Q96MT1 663 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 DPY30Q9C005 99 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 ACTR8Q9H981 624 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 RNF19AQ9NV58 838 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 AK9Q5TCS8 1911 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 NDUFB5O43674 189 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 PGM3O95394 542 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 ETS2P15036 469 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 JAK1P23458 1154 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 KLRC2P26717 231 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 TALDO1P37837 337 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 FSCN1Q16658 493 aaKnown RBP12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 PERM1Q5SV97 790 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 CCDC167Q9P0B6 97 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 CROTQ9UKG9 612 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SALL3Q9BXA9 1300 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 RTN3O95197 1032 aaPredicted RBP12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SHBGP04278 402 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SERPINE1P05121 402 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 SERPINF2P08697 491 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 CDH8P55286 799 aa12.42□□□□□ -0.42
CCDC144A-204ENST00000360524 YWHAZP63104 245 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms