RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 RAD54BQ9Y620 910 aa6.96□□□□□ -1.3
HHLA3-201ENST00000359875 PCDH15Q96QU1 1955 aa6.96□□□□□ -1.3
HHLA3-201ENST00000359875 SLC12A8A0AV02 714 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 TYW5A2RUC4 315 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 WASH3PC4AMC7 463 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 BCAT2O15382 392 aaPredicted RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 P4HA2O15460 535 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 IRAK2O43187 625 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 SART1O43290 800 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 HYAL3O43820 417 aaPredicted RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 ATP5BP06576 529 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 EPHX1P07099 455 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 VDRP11473 427 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 ANP32AP39687 249 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 PRCPP42785 496 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 COPAP53621 1224 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 RING1Q06587 406 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 ADIGQ0VDE8 80 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 CETN1Q12798 172 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 GRIK2Q13002 908 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 CAMK2GQ13555 558 aaPredicted RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 STIM1Q13586 685 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 ELOAQ14241 798 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 ZNF234Q14588 700 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 TRIP6Q15654 476 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 GOLGA7BQ2TAP0 167 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 TTC31Q49AM3 519 aaPredicted RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 DCAF17Q5H9S7 520 aaPredicted RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 TCERG1LQ5VWI1 586 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 BSPRYQ5W0U4 402 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 MSANTD2Q6P1R3 559 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 FOXR2Q6PJQ5 311 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 C8orf86Q6ZUL3 223 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 NAXDQ8IW45 347 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 UNC45BQ8IWX7 931 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 SMYD4Q8IYR2 804 aaPredicted RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 KDM1BQ8NB78 822 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 OR2T3Q8NH03 318 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 ZCCHC14Q8WYQ9 949 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 TTC9Q92623 222 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 SEMA4DQ92854 862 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 AZIN2Q96A70 460 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 TMA16Q96EY4 203 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 DDX50Q9BQ39 737 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 TRIM62Q9BVG3 475 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 GPR174Q9BXC1 333 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 ULBP1Q9BZM6 244 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 CIPCQ9C0C6 399 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 KIAA1522Q9P206 1035 aaPredicted RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 ARMCX3Q9UH62 379 aaPredicted RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 TPX2Q9ULW0 747 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 SCML1Q9UN30 329 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 PLA2G4CQ9UP65 541 aa6.95□□□□□ -1.3
HHLA3-201ENST00000359875 APOBEC2Q9Y235 224 aaKnown RBP6.95□□□□□ -1.3
HHLA3-201ENST00000359875 CHD6Q8TD26 2715 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 SPAARA0A1B0GVQ0 90 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 YJEFN3A6XGL0 299 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 KCNJ18B7U540 433 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 E7ENQ6 273 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 O00370 1275 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 PSMA7O14818 248 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 FLRT2O43155 660 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 FBXO21O94952 628 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 DNTTP04053 509 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 ASLP04424 464 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 HMBSP08397 361 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 DLDP09622 509 aaKnown RBP6.94□□□□□ -1.3
HHLA3-201ENST00000359875 CD19P15391 556 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 HOXD9P28356 352 aaPredicted RBP6.94□□□□□ -1.3
HHLA3-201ENST00000359875 HLA-FP30511 346 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 MATKP42679 507 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 GRIA4P48058 902 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 SLC11A2P49281 568 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 AFF3P51826 1226 aaKnown RBP6.94□□□□□ -1.3
HHLA3-201ENST00000359875 DAOAP59103 153 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 UBE2HP62256 183 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 MEA1Q16626 185 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 CBWD6Q4V339 395 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 CBWD3Q5JTY5 395 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 CBWD5Q5RIA9 395 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 DCAF12L1Q5VU92 463 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 LCLAT1Q6UWP7 414 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 DBX2Q6ZNG2 339 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 BHLHA9Q7RTU4 235 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 KIAA0907Q7Z7F0 614 aaPredicted RBP6.94□□□□□ -1.3
HHLA3-201ENST00000359875 FMNL3Q8IVF7 1028 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 CCDC117Q8IWD4 279 aaPredicted RBP6.94□□□□□ -1.3
HHLA3-201ENST00000359875 ZCCHC9Q8N567 271 aaKnown RBP6.94□□□□□ -1.3
HHLA3-201ENST00000359875 DEFB119Q8N690 84 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 UBR7Q8N806 425 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 ERCC4Q92889 916 aaPredicted RBP6.94□□□□□ -1.3
HHLA3-201ENST00000359875 SLC35C1Q96A29 364 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 CCDC97Q96F63 343 aaPredicted RBP6.94□□□□□ -1.3
HHLA3-201ENST00000359875 IFT43Q96FT9 208 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 P2RY11Q96G91 374 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 HSFY1Q96LI6 401 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 CDC6Q99741 560 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 SLC6A17Q9H1V8 727 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 LHX5Q9H2C1 402 aa6.94□□□□□ -1.3
HHLA3-201ENST00000359875 TMEM245Q9H330 911 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms