RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PLOD3O60568 738 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 EGFRP00533 1210 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 ZNF286BP0CG31 522 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 MARC1Q5VT66 337 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 ZFP1Q6P2D0 407 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 UCMAQ8WVF2 138 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 WDR60Q8WVS4 1066 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 ATXN2LQ8WWM7 1075 aaKnown RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 TMEM159Q96B96 161 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 REXO5Q96IC2 774 aaKnown RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 BTBD9Q96Q07 612 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 NMRAL1Q9HBL8 299 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 TRMT13Q9NUP7 481 aaKnown RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 DDX43Q9NXZ2 648 aaKnown RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 SMIM22K7EJ46 135 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 F9P00740 461 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 TFRCP02786 760 aaKnown RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 NFKB1P19838 968 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 S100A3P33764 101 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 SPIRE1Q08AE8 756 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 ENGASEQ8NFI3 743 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 NAT9Q9BTE0 207 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 SNTG2Q9NY99 539 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 PCDHGA3Q9Y5H0 932 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 CAMTA2O94983 1202 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 PECAM1P16284 738 aaPredicted RBP16.3■□□□□ 0.2
COL18A1-203ENST00000359759 OR1E1P30953 314 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 RCVRNP35243 200 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 AKR1D1P51857 326 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 SLC25A3Q00325 362 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 DCTN2Q13561 401 aaKnown RBP16.3■□□□□ 0.2
COL18A1-203ENST00000359759 AADACL2Q6P093 401 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 ZKSCAN4Q969J2 545 aaPredicted RBP16.3■□□□□ 0.2
COL18A1-203ENST00000359759 GSTK1Q9Y2Q3 226 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 ZBTB11O95625 1053 aaPredicted RBP16.3■□□□□ 0.2
COL18A1-203ENST00000359759 GRIA3P42263 894 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 BST2Q10589 180 aaKnown RBP16.3■□□□□ 0.2
COL18A1-203ENST00000359759 TMEM63BQ5T3F8 832 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 OR7A2PQ8NGA2 310 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 EHD4Q9H223 541 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 ELL3Q9HB65 397 aaPredicted RBP16.3■□□□□ 0.2
COL18A1-203ENST00000359759 ANAPC2Q9UJX6 822 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 ANKRD6Q9Y2G4 727 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 PCP4L1A6NKN8 68 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 USP12O75317 370 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 POMCP01189 267 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 TMC7Q7Z402 723 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 COL26A1Q96A83 441 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 PGLYRP2Q96PD5 576 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 SLC25A27O95847 323 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 CCNA2P20248 432 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 JAK1P23458 1154 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 IFNGR2P38484 337 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 GP5P40197 560 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 EIF3MQ7L2H7 374 aaKnown RBP16.3■□□□□ 0.2
COL18A1-203ENST00000359759 CHST13Q8NET6 341 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 XPNPEP3Q9NQH7 507 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 FNBP1LQ5T0N5 605 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 EEF1AKMT1Q8WVE0 214 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 ABCG8Q9H221 673 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 MCUBQ9NWR8 336 aa16.3■□□□□ 0.2
COL18A1-203ENST00000359759 ANXA6P08133 673 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 TUBP50607 506 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 CDH17Q12864 832 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 DNPEPQ9ULA0 475 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 CHD1O14646 1710 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 NTRK1P04629 796 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 PRG2P13727 222 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 CRADDP78560 199 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 PRR5LQ6MZQ0 368 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 NT5DC4Q86YG4 428 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 FNIP1Q8TF40 1166 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 HTR3CQ8WXA8 447 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 IL25Q9H293 177 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 PLA2G4CQ9UP65 541 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 GAKO14976 1311 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 MAGEB16A2A368 324 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 AREL1O15033 823 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 CD3EAPO15446 510 aaKnown RBP16.29■□□□□ 0.2
COL18A1-203ENST00000359759 SEC24AO95486 1093 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 SCRN3Q0VDG4 424 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 QPRTQ15274 297 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 CRISPLD1Q9H336 500 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 A0A1W2PRG6 482 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 EPORP19235 508 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 ADRA1DP25100 572 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 PTPN11Q06124 597 aaPredicted RBP16.29■□□□□ 0.2
COL18A1-203ENST00000359759 CBWD6Q4V339 395 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 IRGCQ6NXR0 463 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 ARMCX6Q7L4S7 300 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 IQCF2Q8IXL9 164 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 AKAP3O75969 853 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 ZSCAN5DPP0CG00 497 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 BIKQ13323 160 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 TTI2Q6NXR4 508 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 TTC7BQ86TV6 843 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 WDR49Q8IV35 697 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 MCOLN2Q8IZK6 566 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 CCDC185Q8N715 623 aa16.29■□□□□ 0.2
COL18A1-203ENST00000359759 NUDT12Q9BQG2 462 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms