RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 OTOP3Q7RTS5 596 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 CMTM5Q96DZ9 223 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 PHACTR1Q9C0D0 580 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 SNX15Q9NRS6 342 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 PNPOQ9NVS9 261 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 ZNF358Q9NW07 568 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 TRHDEQ9UKU6 1024 aa11.43□□□□□ -0.58
SSU72-202ENST00000359060 PRR5-ARHGAP8B1AHC4 643 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 PSMD3O43242 534 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 TRPA1O75762 1119 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 ZMPSTE24O75844 475 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 LRIG2O94898 1065 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 OR4Q2P0C623 313 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 VAV1P15498 845 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 VHLP40337 213 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SLC18A1P54219 525 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 DAOAP59103 153 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 ARHGAP8P85298 464 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SEMA5AQ13591 1074 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SLC39A12Q504Y0 691 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 FAM228AQ86W67 206 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 TP53INP2Q8IXH6 220 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SCG3Q8WXD2 468 aaKnown RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 RPRD1AQ96P16 312 aaPredicted RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 FAM124BQ9H5Z6 455 aaPredicted RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 DENND2DQ9H6A0 471 aaPredicted RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 ZNF180Q9UJW8 692 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SSX2IPQ9Y2D8 614 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 PDE5AO76074 875 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 STAU1O95793 577 aaKnown RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 TCN1P20061 433 aaPredicted RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 IL4RP24394 825 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SLC25A3Q00325 362 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 USP4Q13107 963 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 ANO4Q32M45 955 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SNX30Q5VWJ9 437 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 PDPK2PQ6A1A2 396 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 CAPRIN2Q6IMN6 1127 aaKnown RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 CHSY1Q86X52 802 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SPATA6LQ8N4H0 392 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 VCX3BQ9H321 246 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 NMRAL1Q9HBL8 299 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 ADA2Q9NZK5 511 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 PRKAG3Q9UGI9 489 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 TSR3Q9UJK0 312 aaKnown RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 ACOT9Q9Y305 439 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 AP3B1O00203 1094 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 PIRO00625 290 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 TRIM13O60858 407 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 GPR32O75388 356 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 CRHR1P34998 444 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 PAPOLAP51003 745 aaKnown RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 GEMP55040 296 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 OCRLQ01968 901 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 ZNF470Q6ECI4 717 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SPATA22Q8NHS9 363 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 KBTBD7Q8WVZ9 684 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SERPINI1Q99574 410 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 DONSONQ9NYP3 566 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 RRN3Q9NYV6 651 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 MPP6Q9NZW5 540 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 MT-CO1P00395 513 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 STMN1P16949 149 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 NAGLUP54802 743 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 CTBP1Q13363 440 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 MOGSQ13724 837 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 DLG2Q15700 870 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 DCP1BQ8IZD4 617 aaKnown RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 EFCAB3Q8N7B9 438 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 TDRD5Q8NAT2 981 aaKnown RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 TMA16Q96EY4 203 aaKnown RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 AGAP2Q99490 1192 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 RCOR3Q9P2K3 495 aaPredicted RBP11.42□□□□□ -0.58
SSU72-202ENST00000359060 BCAP29Q9UHQ4 241 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 PACSIN3Q9UKS6 424 aa11.42□□□□□ -0.58
SSU72-202ENST00000359060 SSC5DA1L4H1 1573 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 ARL5CA6NH57 179 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 MANSC4A6NHS7 340 aaPredicted RBP11.41□□□□□ -0.58
SSU72-202ENST00000359060 GSC2O15499 205 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 SMIM24O75264 130 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 CCNB1P14635 433 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 WARSP23381 471 aaKnown RBP11.41□□□□□ -0.58
SSU72-202ENST00000359060 PTPN3P26045 913 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 NUDT2P50583 147 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 STX1BP61266 288 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 KLC1Q07866 573 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 CSHL1Q14406 222 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 ANKRD20A4Q4UJ75 823 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 RASIP1Q5U651 963 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 GPR152Q8TDT2 470 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 RMDN1Q96DB5 314 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 CLPTM1LQ96KA5 538 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 TMEM216Q9P0N5 145 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 ZMYND8Q9ULU4 1186 aaPredicted RBP11.41□□□□□ -0.58
SSU72-202ENST00000359060 PADI3Q9ULW8 664 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 PROCP04070 461 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 MLNP12872 115 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 GMPRP36959 345 aa11.41□□□□□ -0.58
SSU72-202ENST00000359060 PTDSS1P48651 473 aaKnown RBP11.41□□□□□ -0.58
SSU72-202ENST00000359060 NPY2RP49146 381 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms