RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 USP3Q9Y6I4 520 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 SYNJ2BP-COX16A0A087WUM0 186 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 NDC80O14777 642 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 MCF2LO15068 1137 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 TGDSO95455 350 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 CRABP2P29373 138 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 RPA3P35244 121 aaPredicted RBP22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 GRIK1P39086 918 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 EIF3EP60228 445 aaKnown RBP22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 DEUP1Q05D60 604 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 NME3Q13232 169 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 NOMO1Q15155 1222 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 IZUMO3Q5VZ72 239 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 SLC9A4Q6AI14 798 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 MARK2Q7KZI7 788 aaKnown RBP22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 PSTKQ8IV42 348 aaKnown RBP22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 PLD5Q8N7P1 536 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 SLC7A14Q8TBB6 771 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 TRIM55Q9BYV6 548 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 NPHS2Q9NP85 383 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 PIGVQ9NUD9 493 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 TMEM39AQ9NV64 488 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 ARL8BQ9NVJ2 186 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 DNAJC17Q9NVM6 304 aaKnown RBP22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 COX16Q9P0S2 106 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 FZD10Q9ULW2 581 aa22.93■■□□□ 1.26
POLR2J2-202ENST00000358438 SF3B1O75533 1304 aaKnown RBP eCLIP22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 APOL1O14791 398 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 PABPC4LP0CB38 370 aaKnown RBP22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 ZSCAN5DPP0CG00 497 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 KRT15P19012 456 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 SLC1A5Q15758 541 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 P3H1Q32P28 736 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 NPNTQ6UXI9 565 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 LRRC43Q8N309 656 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 C9orf72Q96LT7 481 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 KCTD15Q96SI1 283 aaPredicted RBP22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 RBM15Q96T37 977 aaKnown RBP eCLIP22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 TMEM175Q9BSA9 504 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 MAGEB5Q9BZ81 275 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 EPB41L1Q9H4G0 881 aa22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 ABI2Q9NYB9 513 aaPredicted RBP22.92■■□□□ 1.26
POLR2J2-202ENST00000358438 COL4A4P53420 1690 aaPredicted RBP22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 ZSCAN9O15535 394 aaPredicted RBP22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 GALTP07902 379 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 RBP3P10745 1247 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 ETS1P14921 441 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 TGM2P21980 687 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 GJA8P48165 433 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 MRPL58Q14197 206 aaKnown RBP22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 MYBPC3Q14896 1274 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 NFE2Q16621 373 aaPredicted RBP22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 CTXN3Q4LDR2 81 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 SCAMP5Q8TAC9 235 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 SKA1Q96BD8 255 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 VPS11Q9H270 941 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 PCDH9Q9HC56 1237 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 IFNB1P01574 187 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 FGFR3P22607 806 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 PBX3P40426 434 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 IKBKEQ14164 716 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 MAP7Q14244 749 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 FUT10Q6P4F1 479 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 CNKSR3Q6P9H4 555 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 NET1Q7Z628 596 aaPredicted RBP22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 KBTBD2Q8IY47 623 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 ADAM32Q8TC27 787 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 FUBP3Q96I24 572 aaKnown RBP eCLIP22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 B3GALT6Q96L58 329 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 C10orf88Q9H8K7 445 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 RRN3Q9NYV6 651 aa22.91■■□□□ 1.26
POLR2J2-202ENST00000358438 NT5C1B-RDH14C9J2C7 533 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 TM9SF1O15321 606 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 IL1BP01584 269 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 CLTBP09497 229 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 SLC5A3P53794 718 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 GDF10P55107 478 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 RPL26P61254 145 aaKnown RBP22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 CDK16Q00536 496 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 HNRNPDQ14103 355 aaKnown RBP22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 TRMT5Q32P41 509 aaKnown RBP22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 BSPRYQ5W0U4 402 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 ZNF280DQ6N043 979 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 C1orf228Q6PIY5 440 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 LVRNQ6Q4G3 990 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 ADGRG6Q86SQ4 1221 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 PYROXD2Q8N2H3 581 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 PDCD7Q8N8D1 485 aaKnown RBP22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 RSAD2Q8WXG1 361 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 EDEM1Q92611 657 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 PGAP3Q96FM1 320 aaPredicted RBP22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 CSPG4P5Q96PW8 444 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 SLC9A7Q96T83 725 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 ECSITQ9BQ95 431 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 GPAMQ9HCL2 828 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 TAS2R1Q9NYW7 299 aa22.9■■□□□ 1.26
POLR2J2-202ENST00000358438 SMIM31A0A1B0GVY4 71 aa22.89■■□□□ 1.26
POLR2J2-202ENST00000358438 TNFRSF10BO14763 440 aa22.89■■□□□ 1.26
POLR2J2-202ENST00000358438 UBTFL6P0CB48 400 aaPredicted RBP22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms