RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GLT6D1Q7Z4J2 308 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 SDR16C5Q8N3Y7 309 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 KRT35Q92764 455 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 MRPL9Q9BYD2 267 aaKnown RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 EPS8L2Q9H6S3 715 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 SMURF1Q9HCE7 757 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TMCO1Q9UM00 188 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 A0A0B4J269 797 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 CCDC162PA2VCL2 907 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TRPC5OSA6NMA1 111 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 RTN2O75298 545 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 NQO1P15559 274 aaKnown RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 MTTPP55157 894 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 ATP1A4Q13733 1029 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 BEND4Q6ZU67 534 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 ARMC8Q8IUR7 673 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 COQ8AQ8NI60 647 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 PPP1R14BQ96C90 147 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 PPP1R16AQ96I34 528 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 GAL3ST1Q99999 423 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TRIM51Q9BSJ1 452 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 C1QTNF1Q9BXJ1 281 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D24Q9ULP9 559 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 VPS9D1Q9Y2B5 631 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 ATP8B1O43520 1251 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 ACAT1P24752 427 aaKnown RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 RGS8P57771 180 aaPredicted RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 SHC4Q6S5L8 630 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 IKBIPQ70UQ0 350 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 LRRC40Q9H9A6 602 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 GIT1Q9Y2X7 761 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 C15orf38-AP3S2A0A0A6YYH1 394 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 MIF4GDA9UHW6 222 aaKnown RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 INPP4BO15327 924 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 TNFRSF21O75509 655 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 CSDE1O75534 798 aaKnown RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 RPL10AP62906 217 aaKnown RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 PDCD4Q53EL6 469 aaKnown RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 PLPP4Q5VZY2 271 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 LIN54Q6MZP7 749 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 GJB7Q6PEY0 223 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 SHQ1Q6PI26 577 aaKnown RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 PLEKHH3Q7Z736 793 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 LINC00523Q86TU6 105 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 KCNB2Q92953 911 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 RNF31Q96EP0 1072 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 ZNRF3Q9ULT6 936 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 IL18RAPO95256 599 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 FMO4P31512 558 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 UBXN2BQ14CS0 331 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 RIPOR1Q6ZS17 1223 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 MTDHQ86UE4 582 aaKnown RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 LGI2Q8N0V4 545 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 PPP1R2P1Q96PQ5 205 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 EQTNQ9NQ60 294 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 WDR35Q9P2L0 1181 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 SF3B1O75533 1304 aaKnown RBP eCLIP9.93□□□□□ -0.824e-6■■■■■ 72.7
CHD3-202ENST00000358181 CLTCQ00610 1675 aaKnown RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 ABCC3O15438 1527 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 A0A0X1KG70 313 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 MTSS1O43312 755 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 ATP9AO75110 1047 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 NDUFB10O96000 172 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 IFNGR2P38484 337 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 CCL23P55773 120 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 RAB25P57735 213 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 MADCAM1Q13477 382 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 ZSWIM2Q8NEG5 633 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 TSEN15Q8WW01 171 aaKnown RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 FEM1CQ96JP0 617 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 HIST1H2AAQ96QV6 131 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 OSBPL5Q9H0X9 879 aaPredicted RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 MYOZ2Q9NPC6 264 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 DAPK2Q9UIK4 370 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 ALKQ9UM73 1620 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 SLC28A2O43868 658 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 RTN3O95197 1032 aaPredicted RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 LCA5LO95447 670 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 CYP17A1P05093 508 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 SLC2A3P11169 496 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 OR1E1P30953 314 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 MAGEA9P43362 315 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 SWI5Q1ZZU3 235 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 PYDC2Q56P42 97 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 ABRAXAS1Q6UWZ7 409 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 ADGRG6Q86SQ4 1221 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 CHST4Q8NCG5 386 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 SEPT1Q8WYJ6 367 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 RMND5BQ96G75 393 aaPredicted RBP9.93□□□□□ -0.82
CHD3-202ENST00000358181 CCSER2Q9H7U1 834 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 FBXO28Q9NVF7 368 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 TAF6LQ9Y6J9 622 aa9.93□□□□□ -0.82
CHD3-202ENST00000358181 GMNCA6NCL1 334 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 NFIAQ12857 509 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 OTUD3Q5T2D3 398 aaPredicted RBP9.92□□□□□ -0.82
CHD3-202ENST00000358181 RASGRP3Q8IV61 690 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 CCT8L2Q96SF2 557 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 CNPY3Q9BT09 278 aa9.92□□□□□ -0.82
CHD3-202ENST00000358181 ADPRHL2Q9NX46 363 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms