RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 FDXACB1Q9BRP7 624 aaPredicted RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 POLR1EQ9GZS1 481 aaKnown RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 ATXN3LQ9H3M9 355 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SNX6Q9UNH7 406 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 ZNF232Q9UNY5 417 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SPATA31A5Q5VU36 1347 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SPATA31A7Q8IWB4 1347 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 CASTOR2A6NHX0 329 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 ANKDD1BA6NHY2 528 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 H3BRB1 525 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 MRASO14807 208 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SNPHO15079 494 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 RECQL5O94762 991 aaPredicted RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 MICAL2O94851 1124 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 ABCB1P08183 1280 aaPredicted RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 ARP10275 920 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 UMPSP11172 480 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 LBPP18428 481 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 HNRNPH1P31943 449 aaKnown RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 S100A3P33764 101 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 IL12RB1P42701 662 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 XRCC4Q13426 336 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 PGM5Q15124 567 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 FGD3Q5JSP0 725 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SLC25A24Q6NUK1 477 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SH3BP5LQ7L8J4 393 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 FAM83AQ86UY5 434 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 ADHFE1Q8IWW8 467 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 DEFB107AQ8IZN7 70 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 CXorf40AQ8TE69 158 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 DPF3Q92784 378 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 MIEF2Q96C03 454 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 CATSPER2Q96P56 530 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 BTBD10Q9BSF8 475 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 TUT1Q9H6E5 874 aaKnown RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 GPRC5CQ9NQ84 441 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 CATSPERZQ9NTU4 200 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SYNPO2Q9UMS6 1093 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 COQ6Q9Y2Z9 468 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SH3GLB1Q9Y371 365 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 NFASCO94856 1347 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 UBE2Q2LH0YL09 131 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 H3BN98 237 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 ACSL4O60488 711 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 CATP04040 527 aaKnown RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 ITGA2P17301 1181 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 S100GP29377 79 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 MAPKAPK2P49137 400 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 CDC42P60953 191 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 ERVK-24P63145 666 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SLC6A3Q01959 620 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 ADIGQ0VDE8 80 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 TROAPQ12815 778 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 BOP1Q14137 746 aaKnown RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 BTG3Q14201 252 aaPredicted RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 INSCQ1MX18 579 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SEZ6Q53EL9 994 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 MZT2BQ6NZ67 158 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 LPCAT2Q7L5N7 544 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 NKAPQ8N5F7 415 aaKnown RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 ITFG1Q8TB96 612 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 METTL6Q8TCB7 284 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 TPD52L3Q96J77 140 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 KIFC1Q9BW19 673 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 POPDC2Q9HBU9 364 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 PRDM8Q9NQV8 689 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SNTG2Q9NY99 539 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 ADAM28Q9UKQ2 775 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 FBXL21Q9UKT6 434 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SPATA2Q9UM82 520 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 MYRFQ9Y2G1 1151 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 INO80Q9ULG1 1556 aaPredicted RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 CPS1P31327 1500 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 WDR27A2RRH5 827 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 RIPK2O43353 540 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 VIL1P09327 827 aaKnown RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 CXCL8P10145 99 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 MMP13P45452 471 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 POU6F1Q14863 301 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 CRY1Q16526 586 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SLC47A2Q86VL8 602 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 LRRC49Q8IUZ0 686 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 LGI2Q8N0V4 545 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 TAS1R2Q8TE23 839 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SUSD6Q92537 303 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 OXNAD1Q96HP4 312 aaPredicted RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 TSPAN18Q96SJ8 248 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 ROGDIQ9GZN7 287 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SPATC1LQ9H0A9 340 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 REEP1Q9H902 201 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 DAPK2Q9UIK4 370 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 RPS6KA6Q9UK32 745 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SORCS3Q9UPU3 1222 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 SALL1Q9NSC2 1324 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 CHURC1-FNTBB4DL54 471 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 MAGEC1O60732 1142 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 ENDOD1O94919 500 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 PLEKP08567 350 aaPredicted RBP6.58□□□□□ -1.36
UPF2-201ENST00000356352 MYBL2P10244 700 aa6.58□□□□□ -1.36
UPF2-201ENST00000356352 COX7A2P14406 83 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms