RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 WWP2O00308 870 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 OR1E1P30953 314 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 RPL21P46778 160 aaKnown RBP15.14■□□□□ 0.01
LMX1B-201ENST00000355497 AMPD2Q01433 879 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 EPS8Q12929 822 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 FNIP1Q8TF40 1166 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 RACGAP1Q9H0H5 632 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 FBXO44Q9H4M3 255 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 NTSP30990 170 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 ITGADQ13349 1161 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 PTPAQ15257 358 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 CBWD6Q4V339 395 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 TCEAL5Q5H9L2 206 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 TMC3Q7Z5M5 1100 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 TFAP2DQ7Z6R9 452 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 SAMD3Q8N6K7 520 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 EDEM1Q92611 657 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 LRRC4BQ9NT99 713 aa15.14■□□□□ 0.01
LMX1B-201ENST00000355497 A0A088AWK7 358 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 CASTOR2A6NHX0 329 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 MGRN1O60291 552 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 IGSF6O95976 241 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 ZNF10P21506 573 aaPredicted RBP15.13■□□□□ 0.01
LMX1B-201ENST00000355497 LRPAP1P30533 357 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 FMO4P31512 558 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 RCVRNP35243 200 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 VPS72Q15906 364 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 NFE2Q16621 373 aaPredicted RBP15.13■□□□□ 0.01
LMX1B-201ENST00000355497 B3GNT6Q6ZMB0 384 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 RD3Q7Z3Z2 195 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 PLEKHH3Q7Z736 793 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 YME1L1Q96TA2 773 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 APBA2Q99767 749 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 SYT15Q9BQS2 421 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 CDHR5Q9HBB8 845 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 OPTCQ9UBM4 332 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 DCDC2CA8MYV0 355 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 TSPAN3O60637 253 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 MTA2O94776 668 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 TUBP50607 506 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 CCR4P51679 360 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 IL2P60568 153 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 BIKQ13323 160 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 ZNF268Q14587 947 aaPredicted RBP15.13■□□□□ 0.01
LMX1B-201ENST00000355497 BTN2A1Q7KYR7 527 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 MTFMTQ96DP5 389 aaKnown RBP15.13■□□□□ 0.01
LMX1B-201ENST00000355497 ZNF184Q99676 751 aaPredicted RBP15.13■□□□□ 0.01
LMX1B-201ENST00000355497 TBCDQ9BTW9 1192 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 GRIP2Q9C0E4 1043 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 ARMCX1Q9P291 453 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 PCDHB5Q9Y5E4 795 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 UBE2QL1A1L167 161 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 ZW10O43264 779 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 GUCY1B2O75343 617 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 PSMG1O95456 288 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 EN1Q05925 392 aaPredicted RBP15.13■□□□□ 0.01
LMX1B-201ENST00000355497 EIF3MQ7L2H7 374 aaKnown RBP15.13■□□□□ 0.01
LMX1B-201ENST00000355497 TAF8Q7Z7C8 310 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 FRMD6Q96NE9 622 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 TSPAN16Q9UKR8 245 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 LRRC7Q96NW7 1537 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 DCXO43602 365 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 MICAL2O94851 1124 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 VAPBO95292 243 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 CXCL8P10145 99 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 KYAT3Q6YP21 454 aaKnown RBP15.13■□□□□ 0.01
LMX1B-201ENST00000355497 TMC7Q7Z402 723 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 SLC5A5Q92911 643 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 TINF2Q9BSI4 451 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 CMTM6Q9NX76 183 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 ARHGAP20Q9P2F6 1191 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 SLC9A8Q9Y2E8 581 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 LYVE1Q9Y5Y7 322 aa15.13■□□□□ 0.01
LMX1B-201ENST00000355497 HUNKP57058 714 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 ADIGQ0VDE8 80 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 RALGDSQ12967 914 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 SPIDRQ14159 915 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 PAGE2BQ5JRK9 111 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 LZTR1Q8N653 840 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 LOC100506127A0A0U1RQW1 187 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 CCDC182A6NF36 153 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 ZBTB14O43829 449 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 CELF2O95319 508 aaKnown RBP15.12■□□□□ 0.01
LMX1B-201ENST00000355497 CCDC130P13994 396 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 FGFR3P22607 806 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 RPL14P50914 215 aaKnown RBP15.12■□□□□ 0.01
LMX1B-201ENST00000355497 LAMTOR4Q0VGL1 99 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 C3orf67Q6ZVT6 689 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 FBXO16Q8IX29 292 aaPredicted RBP15.12■□□□□ 0.01
LMX1B-201ENST00000355497 OR52L1Q8NGH7 329 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 AGO4Q9HCK5 861 aaKnown RBP15.12■□□□□ 0.01
LMX1B-201ENST00000355497 PECAM1P16284 738 aaPredicted RBP15.12■□□□□ 0.01
LMX1B-201ENST00000355497 SLC26A2P50443 739 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 DGCR6Q14129 220 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 GPSM1Q86YR5 675 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 QRFPRQ96P65 431 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 KBTBD4Q9NVX7 518 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 ING3Q9NXR8 418 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 KCNK4Q9NYG8 393 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 TRDMT1O14717 391 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms