RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 C3orf62Q6ZUJ4 267 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 KRT25Q7Z3Z0 450 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 BMP8AQ7Z5Y6 402 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 C14orf80Q86SX3 495 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 PIM3Q86V86 326 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 CIR1Q86X95 450 aaPredicted RBP5.81□□□□□ -1.48
CD47-201ENST00000355354 CD302Q8IX05 232 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 PELI3Q8N2H9 469 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 OTUD6BQ8N6M0 293 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 USP13Q92995 863 aaPredicted RBP5.81□□□□□ -1.48
CD47-201ENST00000355354 PTCD3Q96EY7 689 aaKnown RBP5.81□□□□□ -1.48
CD47-201ENST00000355354 WFDC6Q9BQY6 131 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 CYP4F11Q9HBI6 524 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 PREBQ9HCU5 417 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 CHRAC1Q9NRG0 131 aa5.81□□□□□ -1.48
CD47-201ENST00000355354 HIVEP3Q5T1R4 2406 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 DVL2O14641 736 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 INPPL1O15357 1258 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 EDF1O60869 148 aaKnown RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 MMP3P08254 477 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PCP11498 1178 aaKnown RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 GOT1P17174 413 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PTGER1P34995 402 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 CYLC1P35663 651 aaPredicted RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 MSH2P43246 934 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 CYP24A1Q07973 514 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 MTMR1Q13613 665 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 CEACAM7Q14002 265 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 CERCAMQ5T4B2 595 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 CD300LGQ6UXG3 332 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 RTN4RL1Q86UN2 441 aaPredicted RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 FBF1Q8TES7 1133 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 USP33Q8TEY7 942 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 GATA6Q92908 595 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 SAMD11Q96NU1 681 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 KCNH6Q9H252 994 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 DHX33Q9H6R0 707 aaKnown RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 POPDC2Q9HBU9 364 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 CIDEBQ9UHD4 219 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PCYOX1Q9UHG3 505 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 GTF2IRD1Q9UHL9 959 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 C15orf41Q9Y2V0 281 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 HNRNPDLO14979 420 aaKnown RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 PRAMEF4O60810 478 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 RECQL4O94761 1208 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 SIX3O95343 332 aaPredicted RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 CCDC130P13994 396 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 YWHAQP27348 245 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 ARSEP51690 589 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PLIN5Q00G26 463 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 RALGDSQ12967 914 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 NKG7Q16617 165 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 NHSL2Q5HYW2 709 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PRAMEF9Q5VWM5 478 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 MFSD14CQ5VZR4 134 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 GDF6Q6KF10 455 aaPredicted RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 SATL1Q86VE3 508 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PARP9Q8IXQ6 854 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 OR2T3Q8NH03 318 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 RXFP2Q8WXD0 754 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 CSF3RQ99062 836 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 S1PR5Q9H228 398 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 SMOC2Q9H3U7 446 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 KCNK9Q9NPC2 374 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PIGVQ9NUD9 493 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 INTS9Q9NV88 658 aaKnown RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 SEC63Q9UGP8 760 aaKnown RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 PTPRBP23467 1997 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 KDM3AQ9Y4C1 1321 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 RASA4BC9J798 803 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PROB1E7EW31 1015 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 RASA4O43374 803 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 THAP12O43422 761 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 GLP2RO95838 553 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 CDH13P55290 713 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 RHPN2Q8IUC4 686 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 ARID3BQ8IVW6 561 aaPredicted RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 ZNF781Q8N8C0 355 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 KBTBD7Q8WVZ9 684 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 KCTD12Q96CX2 325 aaKnown RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 CEP170P1Q96L14 293 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PIF1Q9H611 641 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 SYNPO2LQ9H987 977 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.8□□□□□ -1.48
CD47-201ENST00000355354 A0A087WZ62 844 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 ANKRD62A6NC57 917 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 BOLA2-SMG1P6H3BVE0 249 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 C2CD2LO14523 706 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PHGDHO43175 533 aaKnown RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 CBFA2T2O43439 604 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 RSL1D1O76021 490 aaKnown RBP5.8□□□□□ -1.48
CD47-201ENST00000355354 C7P10643 843 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PPP1R2P41236 205 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 CCNIQ14094 377 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 NFIL3Q16649 462 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 XKR9Q5GH70 373 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 BSPRYQ5W0U4 402 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 PPP1R2P3Q6NXS1 205 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 ACOT1Q86TX2 421 aa5.8□□□□□ -1.48
CD47-201ENST00000355354 RNF135Q8IUD6 432 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms