RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 SLC39A4Q6P5W5 647 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 B3GNT9Q6UX72 402 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 KCTD8Q6ZWB6 473 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 IQCF2Q8IXL9 164 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 MPP5Q8N3R9 675 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 CCDC24Q8N4L8 307 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 DCAF4Q8WV16 495 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 ZNF606Q8WXB4 792 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 ADA2Q9NZK5 511 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 SLC17A6Q9P2U8 582 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 DNMT3BQ9UBC3 853 aaKnown RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 DKK3Q9UBP4 350 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 TBX20Q9UMR3 447 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 GAKO14976 1311 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 TNFRSF10AO00220 468 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 S100BP04271 92 aaPredicted RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 APRTP07741 180 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 KRT7P08729 469 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 MATN1P21941 496 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 ADORA2AP29274 412 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 POLR2BP30876 1174 aaKnown RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 TPTEP56180 551 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 IFITM2Q01629 132 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 ITPK1Q13572 414 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 CUL2Q13617 745 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 NEDD8Q15843 81 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 LDLRAP1Q5SW96 308 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 NAPRTQ6XQN6 538 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 ITIH5Q86UX2 942 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 KIAA0319LQ8IZA0 1049 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 UNC5BQ8IZJ1 945 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 ATP6V0D2Q8N8Y2 350 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 TDRD5Q8NAT2 981 aaKnown RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 SLC7A3Q8WY07 619 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 PPWD1Q96BP3 646 aaKnown RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 SIGLEC10Q96LC7 697 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 ZNF347Q96SE7 839 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 UHRF1Q96T88 793 aaPredicted RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 NPAS2Q99743 824 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 KIFC3Q9BVG8 833 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 SMARCAD1Q9H4L7 1026 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 PDZD7Q9H5P4 517 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 DDX4Q9NQI0 724 aaKnown RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 ZNF358Q9NW07 568 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 RBAKQ9NYW8 714 aaPredicted RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 ANKMY1Q9P2S6 941 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 CNOT6Q9ULM6 557 aaKnown RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 SLC27A5Q9Y2P5 690 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 RGPD3A6NKT7 1758 aaPredicted RBP8.01□□□□□ -1.13
CD46-203ENST00000354848 RGPD4Q7Z3J3 1758 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 TADA2AO75478 443 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 KCNH1O95259 989 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 PSMA2P25787 234 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 SLC7A1P30825 629 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 OPRL1P41146 370 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 NME5P56597 212 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 TNK2Q07912 1038 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 E2F2Q14209 437 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 NOMO1Q15155 1222 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 TAF5Q15542 800 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 PPM1JQ5JR12 505 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 CYP4A22Q5TCH4 519 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 MMAAQ8IVH4 418 aaKnown RBP8.01□□□□□ -1.13
CD46-203ENST00000354848 MAP4K3Q8IVH8 894 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 CPSF7Q8N684 471 aaKnown RBP8.01□□□□□ -1.13
CD46-203ENST00000354848 KCTD6Q8NC69 237 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 LRRC39Q96DD0 335 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 EBNA1BP2Q99848 306 aaKnown RBP8.01□□□□□ -1.13
CD46-203ENST00000354848 ADI1Q9BV57 179 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 TEKT3Q9BXF9 490 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 VRTNQ9H8Y1 702 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 APOBEC3GQ9HC16 384 aaKnown RBP8.01□□□□□ -1.13
CD46-203ENST00000354848 PAK5Q9P286 719 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 SUCOQ9UBS9 1254 aaKnown RBP8.01□□□□□ -1.13
CD46-203ENST00000354848 CTDP1Q9Y5B0 961 aaPredicted RBP8.01□□□□□ -1.13
CD46-203ENST00000354848 A0A1W2PQ67 120 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 TMEM150BA6NC51 233 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 A6NL46 340 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 GMNNO75496 209 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 TIPRLO75663 272 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 CLIC3O95833 236 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 CHEK2O96017 543 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 ALOX5P09917 674 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 YBX3P16989 372 aaKnown RBP eCLIP8.01□□□□□ -1.13
CD46-203ENST00000354848 MZF1P28698 734 aaPredicted RBP8.01□□□□□ -1.13
CD46-203ENST00000354848 TMBIM6P55061 237 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 ADAM17P78536 824 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 CNTN2Q02246 1040 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 MERTKQ12866 999 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 TMEM198Q66K66 360 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 PPP2R2DQ66LE6 453 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 TRMT1LQ7Z2T5 733 aaKnown RBP8.01□□□□□ -1.13
CD46-203ENST00000354848 TNS4Q8IZW8 715 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 GPD1LQ8N335 351 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 SAMD3Q8N6K7 520 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 ANKFN1Q8N957 763 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 Q8N9G6 341 aaPredicted RBP8.01□□□□□ -1.13
CD46-203ENST00000354848 PDPRQ8NCN5 879 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 TMEM161BQ8NDZ6 487 aa8.01□□□□□ -1.13
CD46-203ENST00000354848 MTG1Q9BT17 334 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms