RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 EEF1DP3Q658K8 133 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 SCARA3Q6AZY7 606 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 EXOC3L1Q86VI1 746 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 TRIM48Q8IWZ4 208 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 KREMEN1Q96MU8 473 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 CDK5RAP1Q96SZ6 601 aaKnown RBP16.3■□□□□ 0.2
PTPN11-201ENST00000351677 VAT1Q99536 393 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 C15orf41Q9Y2V0 281 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 UMODL1Q5DID0 1318 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 CCT8P50990 548 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 PRKAA2P54646 552 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 MARSP56192 900 aaKnown RBP16.3■□□□□ 0.2
PTPN11-201ENST00000351677 ISLR2Q6UXK2 745 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 PIGZQ86VD9 579 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 GLMNQ92990 594 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 BUD23O43709 281 aaKnown RBP16.3■□□□□ 0.2
PTPN11-201ENST00000351677 MRPL28Q13084 256 aaKnown RBP16.3■□□□□ 0.2
PTPN11-201ENST00000351677 CCDC142Q17RM4 750 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 ARMC6Q6NXE6 501 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 DNAJC14Q6Y2X3 702 aaPredicted RBP16.3■□□□□ 0.2
PTPN11-201ENST00000351677 UNC5AQ6ZN44 842 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 TMEM86AQ8N2M4 240 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 PYDC1Q8WXC3 89 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 ZMAT2Q96NC0 199 aaKnown RBP16.3■□□□□ 0.2
PTPN11-201ENST00000351677 SH3GL1Q99961 368 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 AVILO75366 819 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 GOT1P17174 413 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 DRG2P55039 364 aaKnown RBP16.3■□□□□ 0.2
PTPN11-201ENST00000351677 BOP1Q14137 746 aaKnown RBP16.3■□□□□ 0.2
PTPN11-201ENST00000351677 ANKS6Q68DC2 871 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 BTN2A2Q8WVV5 523 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 MFSD14AQ96MC6 490 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 SIKE1Q9BRV8 207 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 FAM50BQ9Y247 325 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 MYO5BQ9ULV0 1848 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 CCDC154A6NI56 674 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 FSCN2O14926 492 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 CKBP12277 381 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 ATG16L2Q8NAA4 619 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 METTL6Q8TCB7 284 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 RNPEPQ9H4A4 650 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 ABCC13Q9NSE7 274 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 COMMD8Q9NX08 183 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 RHBDL2Q9NX52 303 aa16.3■□□□□ 0.2
PTPN11-201ENST00000351677 DISP2A7MBM2 1401 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 ROBO3Q96MS0 1386 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 RAD51BO15315 384 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 SMIM10L2AP0DMW4 78 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 SMIM10L2BP0DMW5 78 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 SERPINH1P50454 418 aaKnown RBP16.29■□□□□ 0.2
PTPN11-201ENST00000351677 RETSATQ6NUM9 610 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 PHF21AQ96BD5 680 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 E7ENQ6 273 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 OPLAHO14841 1288 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 ABCB1P08183 1280 aaPredicted RBP16.29■□□□□ 0.2
PTPN11-201ENST00000351677 NUDT17P0C025 328 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 FAM58BPP0C7Q3 252 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 IMPDH2P12268 514 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 ME2P23368 584 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 ERAP2Q6P179 960 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 TINF2Q9BSI4 451 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 IL22Q9GZX6 179 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 NDUFA13Q9P0J0 144 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 ZNF112Q9UJU3 913 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 ADRM1Q16186 407 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 NEPROQ6NW34 567 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 FAM9CQ8IZT9 166 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 SEMA6AQ9H2E6 1030 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 NRCAMQ92823 1304 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 SYNCRIPO60506 623 aaKnown RBP16.29■□□□□ 0.2
PTPN11-201ENST00000351677 EFCAB14O75071 495 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 FCGR1AP12314 374 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 NFKB1P19838 968 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 DRD4P21917 467 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 RPL14P50914 215 aaKnown RBP16.29■□□□□ 0.2
PTPN11-201ENST00000351677 CERS2Q96G23 380 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 NSMCE2Q96MF7 247 aa16.29■□□□□ 0.2
PTPN11-201ENST00000351677 UBA2Q9UBT2 640 aaPredicted RBP16.29■□□□□ 0.2
PTPN11-201ENST00000351677 KRT6AP02538 564 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 KRT6BP04259 564 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 KRT6CP48668 564 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 DEFA1P59665 94 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 DEFA3P59666 94 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 CCDC15Q0P6D6 951 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 CXCL17Q6UXB2 119 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 LGMNQ99538 433 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 OSGEPL1Q9H4B0 414 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 ALG9Q9H6U8 611 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 PADI4Q9UM07 663 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 CLDN5O00501 218 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 RGS5O15539 181 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 SEC22BO75396 215 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 ZMPSTE24O75844 475 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 RTN3O95197 1032 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-201ENST00000351677 ZNF7P17097 686 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-201ENST00000351677 CDC25CP30307 473 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 PCDH20Q8N6Y1 951 aaKnown RBP16.28■□□□□ 0.2
PTPN11-201ENST00000351677 ZNF513Q8N8E2 541 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-201ENST00000351677 OR56A4Q8NGH8 313 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms