RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 C14orf80Q86SX3 495 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 LRRC6Q86X45 466 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 LRRC34Q8IZ02 419 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 UMODL1-AS1Q8N2C9 162 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 CNTD1Q8N815 330 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 RTL3Q8N8U3 475 aaKnown RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 ANKRD42Q8N9B4 389 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 BANPQ8N9N5 519 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 STKLD1Q8NE28 680 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 DEPDC1BQ8WUY9 529 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 FBXO32Q969P5 355 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 TTC17Q96AE7 1141 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 ZNF689Q96CS4 500 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 STAMBPL1Q96FJ0 436 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 CFAP36Q96G28 342 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 OXNAD1Q96HP4 312 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 IGSF21Q96ID5 467 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 SEC16BQ96JE7 1060 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 MAGEB18Q96M61 343 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 SMC6Q96SB8 1091 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 NAT9Q9BTE0 207 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 PPP1R12CQ9BZL4 782 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 SLC39A8Q9C0K1 460 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 NOL6Q9H6R4 1146 aaKnown RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 KIF9Q9HAQ2 790 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 RC3H2Q9HBD1 1191 aaKnown RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 KCNK9Q9NPC2 374 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 TLR8Q9NR97 1041 aaKnown RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 NKIRAS1Q9NYS0 192 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 KLHL8Q9P2G9 620 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-203ENST00000350034 HSFX1Q9UBD0 423 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 ZNF212Q9UDV6 495 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 NUDT5Q9UKK9 219 aa7.09□□□□□ -1.27
TRIM55-203ENST00000350034 PLXNA3P51805 1871 aa7.09□□□□□ -1.28
TRIM55-203ENST00000350034 CEP290O15078 2479 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 VWA8A3KMH1 1905 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 ABHD14A-ACY1A0A1B0GW23 586 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 WDR27A2RRH5 827 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 HMX2A2RU54 273 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SLC38A8A6NNN8 435 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MATN3O15232 486 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TM9SF1O15321 606 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SPAG7O75391 227 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SOAT2O75908 522 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 PIAS1O75925 651 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 ABLIM3O94929 683 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 ZWINTO95229 277 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 PEX11BO96011 259 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 INHBAP08476 426 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 DHRS4L1P0CG22 281 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 CSH1P0DML2 217 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 CSH2P0DML3 217 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SRGAP2BP0DMP2 458 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 CPB1P15086 417 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 RHOQP17081 205 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 PGAM1P18669 254 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 ATF6P18850 670 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 KRT4P19013 534 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 NFKB1P19838 968 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TAC1P20366 129 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 DNAJB2P25686 324 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MGAT1P26572 445 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 FOXN2P32314 431 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 PBX3P40426 434 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TUBP50607 506 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 NEK3P51956 506 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 IL9RQ01113 521 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TNK2Q07912 1038 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 DUSP4Q13115 394 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MTA1Q13330 715 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 NAB1Q13506 487 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 IKBKEQ14164 716 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SPARCL1Q14515 664 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 LRRC14Q15048 493 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SLC1A5Q15758 541 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 USP41Q3LFD5 358 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MGAT5BQ3V5L5 792 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 C5orf22Q49AR2 442 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MS4A13Q5J8X5 152 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TTC39BQ5VTQ0 682 aaPredicted RBP7.08□□□□□ -1.28
TRIM55-203ENST00000350034 RWDD4Q6NW29 188 aaKnown RBP7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TRMT10BQ6PF06 316 aaKnown RBP7.08□□□□□ -1.28
TRIM55-203ENST00000350034 PRSS55Q6UWB4 352 aaPredicted RBP7.08□□□□□ -1.28
TRIM55-203ENST00000350034 ARHGAP36Q6ZRI8 547 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MICALCLQ6ZW33 695 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MARK2Q7KZI7 788 aaKnown RBP7.08□□□□□ -1.28
TRIM55-203ENST00000350034 DEFB128Q7Z7B8 93 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TMEM135Q86UB9 458 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 CNPY4Q8N129 248 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 C4orf33Q8N1A6 199 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 SLC39A11Q8N1S5 342 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 PPM1NQ8N819 430 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 ATP6V0D2Q8N8Y2 350 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 FBXO22Q8NEZ5 403 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 MGARPQ8TDB4 240 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 OVCA2Q8WZ82 227 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 TOP1MTQ969P6 601 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 ARMC5Q96C12 935 aa7.08□□□□□ -1.28
TRIM55-203ENST00000350034 ZNF419Q96HQ0 510 aaPredicted RBP7.08□□□□□ -1.28
TRIM55-203ENST00000350034 CELF6Q96J87 481 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms