RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 USP37Q86T82 979 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 ZNF598Q86UK7 904 aaKnown RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 ZNF354CQ86Y25 554 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 ARHGEF19Q8IW93 802 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 GRAPLQ8TC17 118 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 NSUN4Q96CB9 384 aaKnown RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 FAM84BQ96KN1 310 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 LENG8Q96PV6 779 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 RAB34Q9BZG1 259 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 RAD21L1Q9H4I0 556 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 TMEM206Q9H813 350 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 VAT1LQ9HCJ6 419 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 HMG20AQ9NP66 347 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 CNOT11Q9UKZ1 510 aaKnown RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 ZNF831Q5JPB2 1677 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 UBR3Q6ZT12 1888 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 B8ZZF3 427 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 HDAC3O15379 428 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 AKAP10O43572 662 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 CALCAP01258 141 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 ITIH1P19827 911 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 POU6F2P78424 691 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 COG2Q14746 738 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 FAM205BPQ63HN1 556 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 CIAPIN1Q6FI81 312 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 SLC47A2Q86VL8 602 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 IGDCC3Q8IVU1 814 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 LEMD2Q8NC56 503 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 OR2T3Q8NH03 318 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 PIWIL2Q8TC59 973 aaKnown RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 MAGED4Q96JG8 741 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 TARS2Q9BW92 718 aaKnown RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 TMEM117Q9H0C3 514 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 NARFLQ9H6Q4 476 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 NOL11Q9H8H0 719 aaKnown RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 SMOXQ9NWM0 555 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 SOCS2O14508 198 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 DYRK3O43781 588 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 FAM189A1O60320 539 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 USP17L8P0C7I0 530 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 MAGP20916 626 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 DPP6P42658 865 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 OCA2Q04671 838 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 SLC10A2Q12908 348 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-203ENST00000349748 BNC2Q6ZN30 1099 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-203ENST00000349748 SNX32Q86XE0 403 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 OFCC1Q8IZS5 231 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 DSELQ8IZU8 1212 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 RDH13Q8NBN7 331 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 TP53I13Q8NBR0 393 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-203ENST00000349748 MINDY2Q8NBR6 621 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 EPS8L1Q8TE68 723 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 RMDN1Q96DB5 314 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 MUC3BQ9H195 1237 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 MAU2Q9Y6X3 613 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 C6orf229H3BNL8 230 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 PDXKO00764 312 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 ZW10O43264 779 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 LIASO43766 372 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 MARCH6O60337 910 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 SLITRK3O94933 977 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 IL18RAPO95256 599 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 KRT6AP02538 564 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 KRT6BP04259 564 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 ENO3P13929 434 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-203ENST00000349748 PRDX5P30044 214 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 GRIA1P42261 906 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 CASP3P42574 277 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 ACOT2P49753 483 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 PIGGQ5H8A4 983 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 FSCBQ5H9T9 825 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 CCDC60Q8IWA6 550 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-203ENST00000349748 CACTIN-AS1Q8N1I8 211 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 APPL2Q8NEU8 664 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 TFAP2CQ92754 450 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 HDAC2Q92769 488 aaKnown RBP10.87□□□□□ -0.67
CAPN3-203ENST00000349748 DYNLL2Q96FJ2 89 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 GLT1D1Q96MS3 346 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 SERPINI1Q99574 410 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 AIFM2Q9BRQ8 373 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 AKIP1Q9NQ31 210 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 PLSCR3Q9NRY6 295 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAPN3-203ENST00000349748 STMN3Q9NZ72 180 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 PSME2Q9UL46 239 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 PSME4Q14997 1843 aa10.87□□□□□ -0.67
CAPN3-203ENST00000349748 TCRBV7S3A2A0A539 114 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 MEIS1O00470 390 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 RFPL2O75678 378 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 SCO1O75880 301 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ARHGEF15O94989 841 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 GCNT3O95395 438 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 HOXA7P31268 230 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 GPLD1P80108 840 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 MRPS15P82914 257 aaKnown RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 MYL7Q01449 175 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 DPYSQ14117 519 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 UNC5AQ6ZN44 842 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ZBTB49Q6ZSB9 765 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 TXNRD3Q86VQ6 643 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms