RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 GP5P40197 560 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 ABCG1P45844 678 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 ZNF157P51786 506 aaPredicted RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 CCNG1P51959 295 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 MGAT3Q09327 533 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 NAB1Q13506 487 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 PM20D1Q6GTS8 502 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 FAM171BQ6P995 826 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 PDZD4Q76G19 769 aaPredicted RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 C10orf107Q8IVU9 208 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 PLD6Q8N2A8 252 aaKnown RBP15.8■□□□□ 0.12
UPF3B-202ENST00000345865 GBA3Q9H227 469 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 LRRC40Q9H9A6 602 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 CHST12Q9NRB3 414 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 GIT1Q9Y2X7 761 aa15.8■□□□□ 0.12
UPF3B-202ENST00000345865 F8W810 466 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 TNPO2O14787 897 aaKnown RBP15.79■□□□□ 0.12
UPF3B-202ENST00000345865 ENO1P06733 434 aaKnown RBP15.79■□□□□ 0.12
UPF3B-202ENST00000345865 TPH1P17752 444 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 PGFP49763 221 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 ARL13BQ3SXY8 428 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 MRPL10Q7Z7H8 261 aaKnown RBP15.79■□□□□ 0.12
UPF3B-202ENST00000345865 SERINC5Q86VE9 423 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 DCLK2Q8N568 766 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 ENDOVQ8N8Q3 282 aaKnown RBP15.79■□□□□ 0.12
UPF3B-202ENST00000345865 DNAAF3Q8N9W5 541 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 SCAMP5Q8TAC9 235 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 N4BP2L2Q92802 583 aaPredicted RBP15.79■□□□□ 0.12
UPF3B-202ENST00000345865 WWP1Q9H0M0 922 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 SNX15Q9NRS6 342 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 DCDC2Q9UHG0 476 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 NEU3Q9UQ49 428 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 RAD54BQ9Y620 910 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 NCAM2O15394 837 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 ATP9BO43861 1147 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 B3GAT3O94766 335 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 TYK2P29597 1187 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 CD52P31358 61 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 ELF1P32519 619 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 SLC1A6P48664 564 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 TUBB3Q13509 450 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 ANKRD20A4Q4UJ75 823 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 ARHGAP36Q6ZRI8 547 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.79■□□□□ 0.12
UPF3B-202ENST00000345865 CNTD1Q8N815 330 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.79■□□□□ 0.12
UPF3B-202ENST00000345865 ACVR1CQ8NER5 493 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 OR10T2Q8NGX3 314 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 WDR60Q8WVS4 1066 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 ZNF419Q96HQ0 510 aaPredicted RBP15.79■□□□□ 0.12
UPF3B-202ENST00000345865 PKMYT1Q99640 499 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 RBBP8Q99708 897 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 CPNE1Q99829 537 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 CCDC106Q9BWC9 280 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 CHRAC1Q9NRG0 131 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 DNAJC16Q9Y2G8 782 aa15.79■□□□□ 0.12
UPF3B-202ENST00000345865 F9P00740 461 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 JCHAINP01591 159 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 ITGB1P05556 798 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 PCSK1P29120 753 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 RPL9P32969 192 aaKnown RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 MAGEA12P43365 314 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 ALDH18A1P54886 795 aaKnown RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 CDK18Q07002 472 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 DLG2Q15700 870 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 HSP90AA5PQ58FG0 334 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 GRTP1Q5TC63 336 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 FSTL4Q6MZW2 842 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 MAVSQ7Z434 540 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 STRA8Q7Z7C7 330 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 GIMAP7Q8NHV1 300 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 PPP1R14CQ8TAE6 165 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 DQX1Q8TE96 717 aaKnown RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 TEKT5Q96M29 485 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 SORT1Q99523 831 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 CAB39LQ9H9S4 337 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 BFARQ9NZS9 450 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 TXNDC16Q9P2K2 825 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 PADI3Q9ULW8 664 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 RPL26L1Q9UNX3 145 aaKnown RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 MRPL42Q9Y6G3 142 aaKnown RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 TDRD15B5MCY1 1934 aaKnown RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 USP1O94782 785 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 EIF4EBP2Q13542 120 aaPredicted RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 UBAP2LQ14157 1087 aaKnown RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 KPNB1Q14974 876 aaKnown RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 ACSBG2Q5FVE4 666 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 INTS6LQ5JSJ4 861 aaKnown RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 ARTNQ5T4W7 220 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 OTOP3Q7RTS5 596 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 IFNL1Q8IU54 200 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 TNS4Q8IZW8 715 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 TEX9Q8N6V9 391 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 PIWIL2Q8TC59 973 aaKnown RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 SOCS4Q8WXH5 440 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 ISL2Q96A47 359 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 EPAS1Q99814 870 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 LBHD1Q9BQE6 289 aaPredicted RBP15.78■□□□□ 0.12
UPF3B-202ENST00000345865 ACBD6Q9BR61 282 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 RRN3Q9NYV6 651 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms