RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 LRRC49Q8IUZ0 686 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 DQX1Q8TE96 717 aaKnown RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 TUBGCP5Q96RT8 1024 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SH3GL1Q99961 368 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 GPRC5CQ9NQ84 441 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 NFS1Q9Y697 457 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 K7EQS6 105 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 TPP1O14773 563 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SLC37A4O43826 429 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 KLHL41O60662 606 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 GYPCP04921 128 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 MYZAPP0CAP1 466 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 CD53P19397 219 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 BMP6P22004 513 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 TKTP29401 623 aaKnown RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 GDI1P31150 447 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 OPRD1P41143 372 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 PPP1R2P41236 205 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SKIV2L2P42285 1042 aaKnown RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 CAMK2GQ13555 558 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 COL9A3Q14050 684 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SPIDRQ14159 915 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 GAS6Q14393 721 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 FAM133BQ5BKY9 247 aaKnown RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 LYSMD4Q5XG99 296 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 DNAJB7Q7Z6W7 309 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 IFT20Q8IY31 132 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SPATA4Q8NEY3 305 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 IFT81Q8WYA0 676 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 PBKQ96KB5 322 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 XPO6Q96QU8 1125 aaKnown RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 TGIF2Q9GZN2 237 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 ABHD10Q9NUJ1 306 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 CNOT8Q9UFF9 292 aaKnown RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SCML2Q9UQR0 700 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 UTRNP46939 3433 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 ZNF185O15231 689 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 PEX11AO75192 247 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 TJP3O95049 919 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 MYBP10242 640 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 MYCLP1P12525 358 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 CCNB1P14635 433 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 SERPINB8P50452 374 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 GUCY2FP51841 1108 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 PMS2P54278 862 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 RAD23BP54727 409 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 INCA1Q0VD86 236 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 TWF1Q12792 350 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 NCOA4Q13772 614 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 STILQ15468 1287 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 ADRM1Q16186 407 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 DAAM2Q86T65 1068 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 ZC3H3Q8IXZ2 948 aaKnown RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 LRRC71Q8N4P6 559 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 DCBLD1Q8N8Z6 715 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 EIF1ADQ8N9N8 165 aaKnown RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 RNF34Q969K3 372 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 LENG8Q96PV6 779 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 SRPK1Q96SB4 655 aaKnown RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 ENAMQ9NRM1 1142 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 ETNK2Q9NVF9 386 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 WRAP73Q9P2S5 460 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 THAP10Q9P2Z0 257 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 TRIM10Q9UDY6 481 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 ZNF180Q9UJW8 692 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 PCOLCE2Q9UKZ9 415 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 GUCA1BQ9UMX6 200 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 PLAAQ9Y263 795 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 CDY1Q9Y6F8 540 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 RALGAPA1Q6GYQ0 2036 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 CETN3O15182 167 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 EXTL3O43909 919 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 TCEA3O75764 348 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 UBOX5O94941 541 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 FAM153BP0C7A2 387 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 NPTX2P47972 431 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 RBP5P82980 135 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 GUCY2DQ02846 1103 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 STK3Q13188 491 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 NR1D2Q14995 579 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 CLUL1Q15846 466 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 GSTA3Q16772 222 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 PARP6Q2NL67 630 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 FAM153CQ494X1 144 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 SOWAHCQ53LP3 525 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 OVOS1Q6IE37 1185 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 CEP68Q76N32 757 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 CCNJLQ8IV13 435 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 DENND6BQ8NEG7 585 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 TTC17Q96AE7 1141 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 RAB3IPQ96QF0 476 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 DDX50Q9BQ39 737 aaKnown RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 CPVLQ9H3G5 476 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 CCDC134Q9H6E4 229 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 PFDN4Q9NQP4 134 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 SAMSN1Q9NSI8 373 aaKnown RBP7.55□□□□□ -1.2
ZNF540-202ENST00000343599 EXOC1Q9NV70 894 aa7.55□□□□□ -1.2
ZNF540-202ENST00000343599 FAM153AQ9UHL3 310 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms