RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 YWHAQP27348 245 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 GPR17Q13304 367 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 OLIG2Q13516 323 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 SEPT7Q16181 437 aaKnown RBP19.05■□□□□ 0.64
HOXA9-201ENST00000343483 SLC39A5Q6ZMH5 540 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 ANKRD33Q7Z3H0 272 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 TMEM175Q9BSA9 504 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 TTPALQ9BTX7 342 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 CRISPLD1Q9H336 500 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 CATSPERBQ9H7T0 1116 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 PHTF1Q9UMS5 762 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 TLR6Q9Y2C9 796 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 STARD13Q9Y3M8 1113 aa19.05■□□□□ 0.64
HOXA9-201ENST00000343483 VWA8A3KMH1 1905 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 KCNU1A8MYU2 1149 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 FGF10O15520 208 aaPredicted RBP19.04■□□□□ 0.64
HOXA9-201ENST00000343483 CXCL10P02778 98 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 TUBP50607 506 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 EFEMP1Q12805 493 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 TRIM60Q495X7 471 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 GALNTL6Q49A17 601 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 RNF43Q68DV7 783 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 CYB5D1Q6P9G0 228 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 PRSS55Q6UWB4 352 aaPredicted RBP19.04■□□□□ 0.64
HOXA9-201ENST00000343483 CCDC63Q8NA47 563 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 RMDN2Q96LZ7 410 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 GORASP1Q9BQQ3 440 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 GBA3Q9H227 469 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 SMYD2Q9NRG4 433 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 TRHDEQ9UKU6 1024 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 HS3ST4Q9Y661 456 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 E9PAM4 449 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 H7C4K7 107 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 USP12O75317 370 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 JCHAINP01591 159 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 COG7P83436 770 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 TLE2Q04725 743 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 TEX44Q53QW1 395 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 MANEALQ5VSG8 457 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 MSANTD2Q6P1R3 559 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.04■□□□□ 0.64
HOXA9-201ENST00000343483 ARHGAP36Q6ZRI8 547 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 ANKS3Q6ZW76 656 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 UBE2Q1Q7Z7E8 422 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 SUGP1Q8IWZ8 645 aaKnown RBP19.04■□□□□ 0.64
HOXA9-201ENST00000343483 ATPAF2Q8N5M1 289 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 SPPL2BQ8TCT7 592 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 ALKBH8Q96BT7 664 aaKnown RBP19.04■□□□□ 0.64
HOXA9-201ENST00000343483 RXFP1Q9HBX9 757 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 SLCO1B3Q9NPD5 702 aa19.04■□□□□ 0.64
HOXA9-201ENST00000343483 MYO16Q9Y6X6 1858 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 RANBP2P49792 3224 aaKnown RBP19.03■□□□□ 0.64
HOXA9-201ENST00000343483 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.03■□□□□ 0.64
HOXA9-201ENST00000343483 VNN2O95498 520 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 TBX18O95935 607 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 NFKB1P19838 968 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 HOXC13P31276 330 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 CD68P34810 354 aaPredicted RBP19.03■□□□□ 0.64
HOXA9-201ENST00000343483 HTR7P34969 479 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 TBX4P57082 545 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 MGAT5Q09328 741 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 TAF10Q12962 218 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 DUSP4Q13115 394 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 TTC39BQ5VTQ0 682 aaPredicted RBP19.03■□□□□ 0.64
HOXA9-201ENST00000343483 ITPRIPL1Q6GPH6 555 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 MIB1Q86YT6 1006 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.03■□□□□ 0.64
HOXA9-201ENST00000343483 FITM2Q8N6M3 262 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 BANPQ8N9N5 519 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 SERAC1Q96JX3 654 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 VAT1Q99536 393 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 MPP6Q9NZW5 540 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 CDY1Q9Y6F8 540 aa19.03■□□□□ 0.64
HOXA9-201ENST00000343483 ARHGAP42A6NI28 874 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 UGT1A9O60656 530 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 RTN3O95197 1032 aaPredicted RBP19.02■□□□□ 0.64
HOXA9-201ENST00000343483 AP2A1O95782 977 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 CSH1P0DML2 217 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 CSH2P0DML3 217 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 ADRA1DP25100 572 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 ALDH7A1P49419 539 aaKnown RBP19.02■□□□□ 0.64
HOXA9-201ENST00000343483 C14orf80Q86SX3 495 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 OR52K1Q8NGK4 314 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 TCP10LQ8TDR4 215 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 USP33Q8TEY7 942 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 THOC1Q96FV9 657 aaKnown RBP19.02■□□□□ 0.64
HOXA9-201ENST00000343483 ECT2Q9H8V3 914 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 UGT1A7Q9HAW7 530 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 UGT1A10Q9HAW8 530 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 UGT1A8Q9HAW9 530 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 NDFIP2Q9NV92 336 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 SYBUQ9NX95 663 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 IL37Q9NZH6 218 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 TTC3P53804 2025 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 SCN5AQ14524 2016 aa19.02■□□□□ 0.64
HOXA9-201ENST00000343483 LAMA2P24043 3122 aaKnown RBP19.02■□□□□ 0.64
HOXA9-201ENST00000343483 FAM159BA6NKW6 160 aa19.02■□□□□ 0.63
HOXA9-201ENST00000343483 TM9SF1O15321 606 aa19.02■□□□□ 0.63
HOXA9-201ENST00000343483 TBC1D4O60343 1298 aa19.02■□□□□ 0.63
HOXA9-201ENST00000343483 EDF1O60869 148 aaKnown RBP19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 1412.9 ms