RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CCDC107Q8WV48 283 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 CIDECQ96AQ7 238 aaPredicted RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 EXOC2Q96KP1 924 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 PLEKHF1Q96S99 279 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 PDGFCQ9NRA1 345 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 RDH8Q9NYR8 311 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 FAM196BA6NMK8 535 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 HSBP1L1C9JCN9 74 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 SNAP29O95721 258 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 NCK1P16333 377 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 RPS8P62241 208 aaKnown RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 SGO1Q5FBB7 561 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 ZNF667Q5HYK9 610 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 ARHGAP27Q6ZUM4 889 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 ZNF276Q8N554 614 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 ZNF398Q8TD17 642 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 CRELD1Q96HD1 420 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 STARD7Q9NQZ5 370 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 EIF3KQ9UBQ5 218 aaKnown RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 FARSAQ9Y285 508 aaKnown RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 SHANK2Q9UPX8 1470 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 IRS4O14654 1257 aaPredicted RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 LRIG2O94898 1065 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 CSN2P05814 226 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 FDFT1P37268 417 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 TDGQ13569 410 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 E2F2Q14209 437 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 SQLEQ14534 574 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 PGS1Q32NB8 556 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 ZNF772Q68DY9 489 aaPredicted RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 IFNL1Q8IU54 200 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 CLYBLQ8N0X4 340 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 PTCD3Q96EY7 689 aaKnown RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 C11orf24Q96F05 449 aaPredicted RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 CEP295NLQ96MC4 621 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 RPS6KB2Q9UBS0 482 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 MAB21L2Q9Y586 359 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 PRDM15P57071 1507 aaPredicted RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 LAMC3Q9Y6N6 1575 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 ECM29Q5VYK3 1845 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 DPPA5A6NC42 116 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 VILLO15195 856 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 GPD1P21695 349 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 AKT1P31749 480 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 NT5C2P49902 561 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 MLLT6P55198 1093 aaPredicted RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 TNK2Q07912 1038 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 SLC10A7Q0GE19 358 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 NAB1Q13506 487 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 TMC3Q7Z5M5 1100 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 PALB2Q86YC2 1186 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 CCNJLQ8IV13 435 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 C7orf31Q8N865 590 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 ACTRT1Q8TDG2 376 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 TFB1MQ8WVM0 346 aaKnown RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 RNF25Q96BH1 459 aaPredicted RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 PIGSQ96S52 555 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 FARP1Q9Y4F1 1045 aaPredicted RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 SAMD9LQ8IVG5 1584 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 SDR42E2A6NKP2 422 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 RGS19P49795 217 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 TPTEP56180 551 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 OR2B6P58173 313 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 PITPNAQ00169 270 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 EIF4A2Q14240 407 aaKnown RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 KCNA10Q16322 511 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 OR6B2Q6IFH4 312 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 USP43Q70EL4 1123 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 WDR49Q8IV35 697 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 CDK20Q8IZL9 346 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 CMTR1Q8N1G2 835 aaKnown RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 RBM4BQ9BQ04 359 aaKnown RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 RBM4Q9BWF3 364 aaKnown RBP6.27□□□□□ -1.41
VCAN-203ENST00000343200 MIEF1Q9NQG6 463 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 APEX2Q9UBZ4 518 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 MAFFQ9ULX9 164 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 SHOC2Q9UQ13 582 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 DYRK1BQ9Y463 629 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 MAU2Q9Y6X3 613 aa6.27□□□□□ -1.41
VCAN-203ENST00000343200 AGRNO00468 2067 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 NEDD4P46934 1319 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 KIAA0586Q9BVV6 1533 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 MGAT4DA6NG13 374 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 BTBD19C9JJ37 291 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 FCHO1O14526 889 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 NR3C2P08235 984 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 USP11P51784 963 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 USP46P62068 366 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 CDK16Q00536 496 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 VPS72Q15906 364 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ZSWIM2Q8NEG5 633 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 BPIFB6Q8NFQ5 453 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 OR2L5Q8NG80 312 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 DIRAS2Q96HU8 199 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 TRIT1Q9H3H1 467 aaKnown RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 GMIPQ9P107 970 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ATP7BP35670 1465 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 WRBO00258 174 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 KCNQ3O43525 872 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 FGAP02671 866 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms