RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CNGB3Q9NQW8 809 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 ACTL7BQ9Y614 415 aa13.4□□□□□ -0.26
COL18A1-201ENST00000342220 TTC24A2A3L6 582 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-201ENST00000342220 ATP2A2P16615 1042 aaKnown RBP13.39□□□□□ -0.27
COL18A1-201ENST00000342220 TPH1P17752 444 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 YWHAQP27348 245 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 MAPRE1Q15691 268 aaKnown RBP13.39□□□□□ -0.27
COL18A1-201ENST00000342220 NFE2Q16621 373 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-201ENST00000342220 RNF43Q68DV7 783 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 RFWD3Q6PCD5 774 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 ASRGL1Q7L266 308 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 POLNQ7Z5Q5 900 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 ALLCQ8N6M5 410 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
COL18A1-201ENST00000342220 TRABDQ9H4I3 376 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 GKN1Q9NS71 199 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 ARHGEF37A1IGU5 675 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 LRIG2O94898 1065 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 ASMTLO95671 621 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 ALADP13716 330 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 CCND1P24385 295 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 MSH2P43246 934 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 RAP1GAP2Q684P5 730 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 RNF135Q8IUD6 432 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 PDIK1LQ8N165 341 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 NUP93Q8N1F7 819 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 ZFAND2BQ8WV99 257 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 APOL5Q9BWW9 433 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 ARHGEF4Q9NR80 690 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 OGDHLQ9ULD0 1010 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 GRID1Q9ULK0 1009 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 IKBKGQ9Y6K9 419 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 SZT2Q5T011 3432 aa13.39□□□□□ -0.27
COL18A1-201ENST00000342220 ABHD2P08910 425 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 IL4RP24394 825 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 C1QTNF8P60827 252 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 RNF220Q5VTB9 566 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 SPRED2Q7Z698 418 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 LRRC43Q8N309 656 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 NIPA2Q8N8Q9 360 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 FCRL2Q96LA5 508 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-201ENST00000342220 RPRD1AQ96P16 312 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-201ENST00000342220 CYP2S1Q96SQ9 504 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 MYLK2Q9H1R3 596 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 SDK1Q7Z5N4 2213 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 KNL1Q8NG31 2342 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 WDR91A4D1P6 747 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 C3orf70A6NLC5 250 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-201ENST00000342220 GOLGA8TH3BQL2 631 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 IRX4P78413 519 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 EFTUD2Q15029 972 aaKnown RBP eCLIP13.38□□□□□ -0.274e-8■■■■■ 28.3
COL18A1-201ENST00000342220 C3orf62Q6ZUJ4 267 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 ZDHHC17Q8IUH5 632 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 LMNTD2Q8IXW0 634 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 STK32AQ8WU08 396 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 BADQ92934 168 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 ETNK1Q9HBU6 452 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 PLK2Q9NYY3 685 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 DTLQ9NZJ0 730 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 TRIM43BA6NCK2 446 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 PAGE1O75459 146 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 RPA3P35244 121 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-201ENST00000342220 ABCG1P45844 678 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 MYBPC3Q14896 1274 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 PDK2Q15119 407 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 TMEM154Q6P9G4 183 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 RFX8Q6ZV50 586 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 CENPUQ71F23 418 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 LONP2Q86WA8 852 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 CHSY1Q86X52 802 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 RIBC1Q8N443 379 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-201ENST00000342220 FBXO36Q8NEA4 188 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 TRIM43Q96BQ3 446 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-201ENST00000342220 UROC1Q96N76 676 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 OSER1Q9NX31 292 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 CXXC1Q9P0U4 656 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-201ENST00000342220 PHTF1Q9UMS5 762 aa13.38□□□□□ -0.27
COL18A1-201ENST00000342220 EYSQ5T1H1 3165 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 A0A1W2PPM1 405 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 I6L893 689 aaPredicted RBP13.37□□□□□ -0.27
COL18A1-201ENST00000342220 DAB1O75553 588 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 ANO7Q6IWH7 933 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 DENND1AQ8TEH3 1009 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 TFB1MQ8WVM0 346 aaKnown RBP13.37□□□□□ -0.27
COL18A1-201ENST00000342220 OCEL1Q9H607 264 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 MARCH5Q9NX47 278 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 MARCH2Q9P0N8 246 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 TLR5O60602 858 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 TMEM63AO94886 807 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 FBXO21O94952 628 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 URODP06132 367 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 KCNQ1P51787 676 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 MAXP61244 160 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 SLC1A5Q15758 541 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 FAM26DQ5JW98 314 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 FNBP1LQ5T0N5 605 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 C16orf59Q7L2K0 433 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 PPM1NQ8N819 430 aa13.37□□□□□ -0.27
COL18A1-201ENST00000342220 GRAMD1AQ96CP6 724 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms