RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 H3BSA7 217 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 KHSRPQ92945 711 aaKnown RBP eCLIP22.88■■□□□ 1.25
TRIM28-202ENST00000341753 HPDLQ96IR7 371 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 RIMS3Q9UJD0 308 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 PAPPA2Q9BXP8 1791 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.88■■□□□ 1.25
TRIM28-202ENST00000341753 CYTH1Q15438 398 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 PTAR1Q7Z6K3 402 aaPredicted RBP22.88■■□□□ 1.25
TRIM28-202ENST00000341753 ABTB1Q969K4 478 aaPredicted RBP22.88■■□□□ 1.25
TRIM28-202ENST00000341753 QKIQ96PU8 341 aaKnown RBP eCLIP22.88■■□□□ 1.25
TRIM28-202ENST00000341753 FAM96AQ9H5X1 160 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 PTPRHQ9HD43 1115 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 CDY2AQ9Y6F7 541 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 CDY1Q9Y6F8 540 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 PTPRFP10586 1907 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 USP12O75317 370 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 SH3BGRP55822 239 aaPredicted RBP22.88■■□□□ 1.25
TRIM28-202ENST00000341753 CEACAM7Q14002 265 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 PPP1R26Q5T8A7 1209 aaPredicted RBP22.88■■□□□ 1.25
TRIM28-202ENST00000341753 HTR3CQ8WXA8 447 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 MRPS26Q9BYN8 205 aaKnown RBP22.88■■□□□ 1.25
TRIM28-202ENST00000341753 RPS6KL1Q9Y6S9 549 aa22.88■■□□□ 1.25
TRIM28-202ENST00000341753 CDK4P11802 303 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 PROZP22891 400 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 DPP6P42658 865 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 GALK1P51570 392 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 IER5Q5VY09 327 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 BNC2Q6ZN30 1099 aaPredicted RBP22.87■■□□□ 1.25
TRIM28-202ENST00000341753 TSHZ1Q6ZSZ6 1077 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 SULF1Q8IWU6 871 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 CCDC185Q8N715 623 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 ZSCAN18Q8TBC5 510 aaPredicted RBP22.87■■□□□ 1.25
TRIM28-202ENST00000341753 KCTD15Q96SI1 283 aaPredicted RBP22.87■■□□□ 1.25
TRIM28-202ENST00000341753 AGAP2Q99490 1192 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 HESX1Q9UBX0 185 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 TNFAIP8O95379 198 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 GOT1P17174 413 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 PSMB4P28070 264 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 SLC5A2P31639 672 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 KYQ8NBH2 561 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 FCRL3Q96P31 734 aaPredicted RBP22.87■■□□□ 1.25
TRIM28-202ENST00000341753 CATSPER2Q96P56 530 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 CSPG4P5Q96PW8 444 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 LIN28AQ9H9Z2 209 aaKnown RBP22.87■■□□□ 1.25
TRIM28-202ENST00000341753 RBPJLQ9UBG7 517 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 AP4E1Q9UPM8 1137 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 PPP2R3BQ9Y5P8 575 aa22.87■■□□□ 1.25
TRIM28-202ENST00000341753 GABBR2O75899 941 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 STAG3L1P0CL83 205 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 P4HA1P13674 534 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 PGAM1P18669 254 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 PHKA2P46019 1235 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 RPL26P61254 145 aaKnown RBP22.86■■□□□ 1.25
TRIM28-202ENST00000341753 NRF1Q16656 503 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 ZNF423Q2M1K9 1284 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 EML3Q32P44 896 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 TMEM259Q4ZIN3 620 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 TTC30AQ86WT1 665 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 ACVR1CQ8NER5 493 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 NUF2Q9BZD4 464 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 G3V2L1 256 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 PAPSS1O43252 624 aaPredicted RBP22.86■■□□□ 1.25
TRIM28-202ENST00000341753 GLDCP23378 1020 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 ACAT1P24752 427 aaKnown RBP22.86■■□□□ 1.25
TRIM28-202ENST00000341753 CELF3Q5SZQ8 465 aaKnown RBP22.86■■□□□ 1.25
TRIM28-202ENST00000341753 NCBP2-AS2Q69YL0 99 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 NXNQ6DKJ4 435 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 ACOT1Q86TX2 421 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 KLHL32Q96NJ5 620 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 RAB26Q9ULW5 256 aa22.86■■□□□ 1.25
TRIM28-202ENST00000341753 A0A0J9YVX5 310 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 MAGEB3O15480 346 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 FAM58BPP0C7Q3 252 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 SAT1P21673 171 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 PRDX6P30041 224 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 LSM12Q3MHD2 195 aaKnown RBP22.85■■□□□ 1.25
TRIM28-202ENST00000341753 LCLAT1Q6UWP7 414 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 STRA8Q7Z7C7 330 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 CXorf38Q8TB03 319 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 KBTBD7Q8WVZ9 684 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 DCPSQ96C86 337 aaKnown RBP22.85■■□□□ 1.25
TRIM28-202ENST00000341753 AGAP3Q96P47 875 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 SEMA6AQ9H2E6 1030 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 TMPRSS4Q9NRS4 437 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 CHCHD3Q9NX63 227 aaKnown RBP22.85■■□□□ 1.25
TRIM28-202ENST00000341753 TRIP11Q15643 1979 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 A0A0A0MRY4 1105 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 ACKR2O00590 384 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 MDM4O15151 490 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 THRAP10827 490 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 GP5P40197 560 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 SLC6A3Q01959 620 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 TMED1Q13445 227 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 PPP2R5DQ14738 602 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 EFCAB12Q6NXP0 572 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 SPATA13Q96N96 652 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 SERPINI1Q99574 410 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 FERMT1Q9BQL6 677 aa22.85■■□□□ 1.25
TRIM28-202ENST00000341753 GATA5Q9BWX5 397 aaPredicted RBP22.85■■□□□ 1.25
TRIM28-202ENST00000341753 BARX2Q9UMQ3 279 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms