RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ANKRD62A6NC57 917 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 LRRIQ4A6NIV6 560 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 GOLGA8RI6L899 631 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 CLASP2O75122 1294 aaKnown RBP12.12□□□□□ -0.47
RTN3-203ENST00000341307 JRKO75564 520 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 EDN1P05305 212 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 GLRA2P23416 452 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 S100A5P33763 92 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 WNT7BP56706 349 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 BOLA3Q53S33 107 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 LILRA2Q8N149 483 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 ZBTB45Q96K62 511 aaPredicted RBP12.12□□□□□ -0.47
RTN3-203ENST00000341307 KLF6Q99612 283 aaPredicted RBP12.12□□□□□ -0.47
RTN3-203ENST00000341307 GCOM2Q9BZD3 368 aaPredicted RBP12.12□□□□□ -0.47
RTN3-203ENST00000341307 CAAP1Q9H8G2 361 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 SAYSD1Q9NPB0 183 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 OLAHQ9NV23 265 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 PSMC3IPQ9P2W1 217 aaPredicted RBP12.12□□□□□ -0.47
RTN3-203ENST00000341307 TRIM64BA6NI03 449 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 DYNC1LI2O43237 492 aaPredicted RBP12.12□□□□□ -0.47
RTN3-203ENST00000341307 GMNNO75496 209 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 GABBR2O75899 941 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 HSPA1AP0DMV8 641 aaKnown RBP12.12□□□□□ -0.47
RTN3-203ENST00000341307 HSPA1BP0DMV9 641 aaKnown RBP12.12□□□□□ -0.47
RTN3-203ENST00000341307 AOC1P19801 751 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 ETV4P43268 484 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 ACOT2P49753 483 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 STAT5BP51692 787 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 PDIA2Q13087 525 aaKnown RBP12.12□□□□□ -0.47
RTN3-203ENST00000341307 TBCCQ15814 346 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 SEZ6Q53EL9 994 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 SCARA3Q6AZY7 606 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 ADCY4Q8NFM4 1077 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 TAS1R2Q8TE23 839 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 MZB1Q8WU39 189 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 NLRP7Q8WX94 980 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 TP53INP1Q96A56 240 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 ZNF668Q96K58 619 aaPredicted RBP12.12□□□□□ -0.47
RTN3-203ENST00000341307 HAPLN2Q9GZV7 340 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 PDGFCQ9NRA1 345 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 ARHGAP28Q9P2N2 729 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 EPS15L1Q9UBC2 864 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
RTN3-203ENST00000341307 IGKV6D-21A0A0A0MT36 114 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 HOXC11O43248 304 aaPredicted RBP12.11□□□□□ -0.47
RTN3-203ENST00000341307 MSI1O43347 362 aaKnown RBP12.11□□□□□ -0.47
RTN3-203ENST00000341307 SCO2O43819 266 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 PROCP04070 461 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 CAPNS1P04632 268 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 HSPA13P48723 471 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 P2RX3P56373 397 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 TXNL4AP83876 142 aaKnown RBP12.11□□□□□ -0.47
RTN3-203ENST00000341307 KCTD2Q14681 263 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 ZBTB41Q5SVQ8 909 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 IZUMO3Q5VZ72 239 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 BTLAQ7Z6A9 289 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 TMEM174Q8WUU8 243 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 SLC7A3Q8WY07 619 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 MMP19Q99542 508 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 PI4K2AQ9BTU6 479 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 SHCBP1LQ9BZQ2 653 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 DHX33Q9H6R0 707 aaKnown RBP12.11□□□□□ -0.47
RTN3-203ENST00000341307 FANCEQ9HB96 536 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 CYP4F11Q9HBI6 524 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 CHORDC1Q9UHD1 332 aaPredicted RBP12.11□□□□□ -0.47
RTN3-203ENST00000341307 BCAP29Q9UHQ4 241 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 PCM1Q15154 2024 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 ILVBLA1L0T0 632 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 AP3B1O00203 1094 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 FSCN2O14926 492 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 CALCAP01258 141 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 SLC1A1P43005 524 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 LIG4P49917 911 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 ZNF135P52742 658 aaPredicted RBP12.11□□□□□ -0.47
RTN3-203ENST00000341307 HSPA14Q0VDF9 509 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 CETN1Q12798 172 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 MESDQ14696 234 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 C15orf59Q2T9L4 293 aaPredicted RBP12.11□□□□□ -0.47
RTN3-203ENST00000341307 PPM1LQ5SGD2 360 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 SYDE1Q6ZW31 735 aaPredicted RBP12.11□□□□□ -0.47
RTN3-203ENST00000341307 CCDC89Q8N998 374 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 CATSPER1Q8NEC5 780 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 ACMSDQ8TDX5 336 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 FEM1CQ96JP0 617 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 LRGUKQ96M69 825 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 KREMEN1Q96MU8 473 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 SLC29A1Q99808 456 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 C17orf80Q9BSJ5 609 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 WNT8AQ9H1J5 351 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
RTN3-203ENST00000341307 CNTN3Q9P232 1028 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 STRIP2Q9ULQ0 834 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 MYRFQ9Y2G1 1151 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 TRAF6Q9Y4K3 522 aa12.11□□□□□ -0.47
RTN3-203ENST00000341307 C7orf72A4D263 438 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 GIPC1O14908 333 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 MCM3APO60318 1980 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 ALX3O95076 343 aa12.1□□□□□ -0.47
RTN3-203ENST00000341307 ERBB2P04626 1255 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms