RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PPIDQ08752 370 aaKnown RBP17.79■□□□□ 0.44
CLDN4-201ENST00000340958 ALFQ53S48 1182 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 FAM182AQ5T1J6 154 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 CFAP58Q5T655 872 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 RNASEH2BQ5TBB1 312 aaKnown RBP17.79■□□□□ 0.44
CLDN4-201ENST00000340958 CIR1Q86X95 450 aaPredicted RBP17.79■□□□□ 0.44
CLDN4-201ENST00000340958 CCDC13Q8IYE1 715 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 CFAP52Q8N1V2 620 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 DEPDC1BQ8WUY9 529 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 AZIN2Q96A70 460 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 HDAC11Q96DB2 347 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 PRMT1Q99873 361 aaKnown RBP17.79■□□□□ 0.44
CLDN4-201ENST00000340958 SLC39A8Q9C0K1 460 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 ADAM7Q9H2U9 754 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 DNAJC17Q9NVM6 304 aaKnown RBP17.79■□□□□ 0.44
CLDN4-201ENST00000340958 A0A0A0MRY4 1105 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 CCDC195A0A1B0GUA6 201 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 WASH4PA8MWX3 477 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 GOLGA8MH3BSY2 632 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 RHOP08100 348 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 OR1E1P30953 314 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 AVPR1AP37288 418 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 DMTNQ08495 405 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 ANKRD20A2Q5SQ80 823 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 ADGRF1Q5T601 910 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 GPR158Q5T848 1215 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 FAXCQ5TGI0 409 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 ANKRD20A1Q5TYW2 823 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 ANKRD20A3Q5VUR7 823 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 PID1Q7Z2X4 250 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 ADGRD2Q7Z7M1 963 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 LEMD2Q8NC56 503 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 TSEN2Q8NCE0 465 aaKnown RBP17.78■□□□□ 0.44
CLDN4-201ENST00000340958 PPP2R3CQ969Q6 453 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 SPATA13Q96N96 652 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 CEP41Q9BYV8 373 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 VIPAS39Q9H9C1 493 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 NDFIP2Q9NV92 336 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 TMEM248Q9NWD8 314 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 ZDHHC7Q9NXF8 308 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 DNMT3BQ9UBC3 853 aaKnown RBP17.78■□□□□ 0.44
CLDN4-201ENST00000340958 HPCAL4Q9UM19 191 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 SHOC2Q9UQ13 582 aa17.78■□□□□ 0.44
CLDN4-201ENST00000340958 IGLV3-10A0A075B6K4 115 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 TYW5A2RUC4 315 aaKnown RBP17.77■□□□□ 0.44
CLDN4-201ENST00000340958 GOLGA6BA6NDN3 693 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 DRGXA6NNA5 263 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 TRDMT1O14717 391 aaKnown RBP17.77■□□□□ 0.44
CLDN4-201ENST00000340958 MAP2K7O14733 419 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 KLKB1P03952 638 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 SLC6A4P31645 630 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 CHKAP35790 457 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 SYCP2LQ5T4T6 812 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 STXBP5Q5T5C0 1151 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 HOOK3Q86VS8 718 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 NLRP14Q86W24 1093 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 ZNF683Q8IZ20 524 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 MREGQ8N565 214 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 ZCCHC9Q8N567 271 aaKnown RBP17.77■□□□□ 0.44
CLDN4-201ENST00000340958 CPT1BQ92523 772 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 FOXP3Q9BZS1 431 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 PRDM6Q9NQX0 595 aa17.77■□□□□ 0.44
CLDN4-201ENST00000340958 ZFP37Q9Y6Q3 630 aaPredicted RBP17.77■□□□□ 0.44
CLDN4-201ENST00000340958 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.77■□□□□ 0.43
CLDN4-201ENST00000340958 ARHGAP42A6NI28 874 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 F5H423 210 aaPredicted RBP17.77■□□□□ 0.43
CLDN4-201ENST00000340958 SMAPO00193 183 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 SCAMP3O14828 347 aaKnown RBP17.77■□□□□ 0.43
CLDN4-201ENST00000340958 TSPAN3O60637 253 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 OPHN1O60890 802 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 PPFIA2O75334 1257 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 OLFM2O95897 454 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 PFKLP17858 780 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 DDX6P26196 483 aaKnown RBP eCLIP17.77■□□□□ 0.437e-7■■■■■ 53.3
CLDN4-201ENST00000340958 PAPOLAP51003 745 aaKnown RBP17.77■□□□□ 0.43
CLDN4-201ENST00000340958 IRAK1P51617 712 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 NDST2P52849 883 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 TEAD2Q15562 447 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 FAM133BQ5BKY9 247 aaKnown RBP17.77■□□□□ 0.43
CLDN4-201ENST00000340958 TCEAL5Q5H9L2 206 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 TIGD7Q6NT04 549 aaPredicted RBP17.77■□□□□ 0.43
CLDN4-201ENST00000340958 RHBDF2Q6PJF5 856 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 GRASPQ7Z6J2 395 aaPredicted RBP17.77■□□□□ 0.43
CLDN4-201ENST00000340958 PRKD2Q9BZL6 878 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 NSUN3Q9H649 340 aaKnown RBP17.77■□□□□ 0.43
CLDN4-201ENST00000340958 IGFLR1Q9H665 355 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 ETNK1Q9HBU6 452 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 OGFRQ9NZT2 677 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 CFAP97Q9P2B7 532 aa17.77■□□□□ 0.43
CLDN4-201ENST00000340958 TP73O15350 636 aa17.76■□□□□ 0.43
CLDN4-201ENST00000340958 RAMP2O60895 175 aa17.76■□□□□ 0.43
CLDN4-201ENST00000340958 APRTP07741 180 aa17.76■□□□□ 0.43
CLDN4-201ENST00000340958 CCNCP24863 283 aa17.76■□□□□ 0.43
CLDN4-201ENST00000340958 HSD17B3P37058 310 aa17.76■□□□□ 0.43
CLDN4-201ENST00000340958 POLD3Q15054 466 aaPredicted RBP17.76■□□□□ 0.43
CLDN4-201ENST00000340958 CENPUQ71F23 418 aa17.76■□□□□ 0.43
CLDN4-201ENST00000340958 UMODL1-AS1Q8N2C9 162 aa17.76■□□□□ 0.43
CLDN4-201ENST00000340958 GOLGA6L1Q8N7Z2 621 aa17.76■□□□□ 0.43
CLDN4-201ENST00000340958 SHKBP1Q8TBC3 707 aa17.76■□□□□ 0.43
CLDN4-201ENST00000340958 PRCCQ92733 491 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms