RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MYO19Q96H55 970 aa15.87■□□□□ 0.13
VAPA-201ENST00000340541 VCPIP1Q96JH7 1222 aa15.87■□□□□ 0.13
VAPA-201ENST00000340541 C1orf74Q96LT6 269 aa15.87■□□□□ 0.13
VAPA-201ENST00000340541 RPRD1AQ96P16 312 aaPredicted RBP15.87■□□□□ 0.13
VAPA-201ENST00000340541 SELENOOQ9BVL4 669 aa15.87■□□□□ 0.13
VAPA-201ENST00000340541 SIK2Q9H0K1 926 aa15.87■□□□□ 0.13
VAPA-201ENST00000340541 SLC6A17Q9H1V8 727 aa15.87■□□□□ 0.13
VAPA-201ENST00000340541 BCCIPQ9P287 314 aaKnown RBP eCLIP15.87■□□□□ 0.13
VAPA-201ENST00000340541 PAXBP1Q9Y5B6 917 aa15.87■□□□□ 0.13
VAPA-201ENST00000340541 MAP1BP46821 2468 aaKnown RBP15.86■□□□□ 0.13
VAPA-201ENST00000340541 IGLV3-10A0A075B6K4 115 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 TMCO5BA8MYB1 307 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 GZMAP12544 262 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 HLA-EP13747 358 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 GPD1P21695 349 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 CSKP41240 450 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 IRX4P78413 519 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 E2F5Q15329 346 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 CDO1Q16878 200 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 PLEKHG6Q3KR16 790 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 ALFQ53S48 1182 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 PLEKHA7Q6IQ23 1121 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 DNAJC24Q6P3W2 148 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 SERPINA13PQ6UXR4 307 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 SLC36A4Q6YBV0 504 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 APCDD1Q8J025 514 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 FRMD1Q8N878 549 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 PIGKQ92643 395 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 ALG14Q96F25 216 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 MRGPRX3Q96LB0 322 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 MRGPRX1Q96LB2 322 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 MCEEQ96PE7 176 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 HAPLN3Q96S86 360 aa15.86■□□□□ 0.13
VAPA-201ENST00000340541 NUSAP1Q9BXS6 441 aaKnown RBP15.86■□□□□ 0.13
VAPA-201ENST00000340541 MKRN2Q9H000 416 aaKnown RBP15.86■□□□□ 0.13
VAPA-201ENST00000340541 KIAA1522Q9P206 1035 aaPredicted RBP15.86■□□□□ 0.13
VAPA-201ENST00000340541 DRGXA6NNA5 263 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 ZBTB24O43167 697 aaPredicted RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 AP5Z1O43299 807 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 CNTN5O94779 1100 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 ATP5BP06576 529 aaKnown RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 PLEKP08567 350 aaPredicted RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 C7P10643 843 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 POLR2EP19388 210 aaKnown RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 MZF1P28698 734 aaPredicted RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 CASP14P31944 242 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 ADRA1BP35368 520 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 CTSOP43234 321 aaPredicted RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 NOVA1P51513 510 aaKnown RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 ZNF143P52747 638 aaPredicted RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 PLK1P53350 603 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 OGDHQ02218 1023 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 MAMLD1Q13495 774 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 CAMK2GQ13555 558 aaPredicted RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 PEAR1Q5VY43 1037 aaPredicted RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 PPP1R2P3Q6NXS1 205 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 SLC23A3Q6PIS1 610 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 RABEPKQ7Z6M1 372 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 CCDC117Q8IWD4 279 aaPredicted RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 ZNF366Q8N895 744 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 CEP76Q8TAP6 659 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 FAM172AQ8WUF8 416 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 ZNF212Q9UDV6 495 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 MBD1Q9UIS9 605 aaPredicted RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 PLA2G4CQ9UP65 541 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 TBC1D30Q9Y2I9 924 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 LUC7L2Q9Y383 392 aaKnown RBP15.85■□□□□ 0.13
VAPA-201ENST00000340541 OR51B4Q9Y5P0 310 aa15.85■□□□□ 0.13
VAPA-201ENST00000340541 UPK3BL1B0FP48 263 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 UPK3BL2E5RIL1 263 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 E9PAM4 449 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 CCP110O43303 1012 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 ATMINO43313 823 aaPredicted RBP15.84■□□□□ 0.13
VAPA-201ENST00000340541 ZNF217O75362 1048 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 CLDN11O75508 207 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 FTLP02792 175 aaPredicted RBP15.84■□□□□ 0.13
VAPA-201ENST00000340541 ASLP04424 464 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 SERPING1P05155 500 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 TPM3P06753 285 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 EPHX1P07099 455 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 HNRNPH3P31942 346 aaKnown RBP15.84■□□□□ 0.13
VAPA-201ENST00000340541 COPAP53621 1224 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 CDH4P55283 916 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 SLC12A1Q13621 1099 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 STARD3Q14849 445 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 FNDC3BQ53EP0 1204 aaKnown RBP15.84■□□□□ 0.13
VAPA-201ENST00000340541 TRIM61Q5EBN2 209 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 ACBD5Q5T8D3 534 aaPredicted RBP15.84■□□□□ 0.13
VAPA-201ENST00000340541 MANEALQ5VSG8 457 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 PGBD3Q8N328 593 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 CCDC185Q8N715 623 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 MAGEB5Q9BZ81 275 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 ISCUQ9H1K1 167 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 CD93Q9NPY3 652 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 PILRBQ9UKJ0 227 aa15.84■□□□□ 0.13
VAPA-201ENST00000340541 BZW2Q9Y6E2 419 aaKnown RBP15.84■□□□□ 0.13
VAPA-201ENST00000340541 TNRC6BQ9UPQ9 1833 aaKnown RBP15.83■□□□□ 0.12
VAPA-201ENST00000340541 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.83■□□□□ 0.12
VAPA-201ENST00000340541 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.83■□□□□ 0.12
VAPA-201ENST00000340541 PATE3B3GLJ2 98 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms