RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CXorf57Q6NSI4 855 aaKnown RBP19.73■□□□□ 0.75
SYNE4-202ENST00000340477 TFAP2DQ7Z6R9 452 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 DNAAF5Q86Y56 855 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 TBC1D31Q96DN5 1066 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 EPAS1Q99814 870 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 C2orf49Q9BVC5 232 aaPredicted RBP19.73■□□□□ 0.75
SYNE4-202ENST00000340477 TMEM245Q9H330 911 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 RETREG1Q9H6L5 497 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 PRDM16Q9HAZ2 1276 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 MPP6Q9NZW5 540 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 INTS6Q9UL03 887 aaKnown RBP19.73■□□□□ 0.75
SYNE4-202ENST00000340477 ERVW-1Q9UQF0 538 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 TBC1D30Q9Y2I9 924 aa19.73■□□□□ 0.75
SYNE4-202ENST00000340477 SSU72P8A0A1W2PR75 194 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 TMEM191CA6NGB0 347 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 CNTN5O94779 1100 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 ACADMP11310 421 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 PLK1P53350 603 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 ADKP55263 362 aaKnown RBP19.72■□□□□ 0.75
SYNE4-202ENST00000340477 ARID5BQ14865 1188 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 SLC18A3Q16572 532 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 RAB6CQ53S08 254 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 ZNF783Q6ZMS7 281 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 ZNF683Q8IZ20 524 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 APCDD1Q8J025 514 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 OR2T3Q8NH03 318 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 CTNNBL1Q8WYA6 563 aaPredicted RBP19.72■□□□□ 0.75
SYNE4-202ENST00000340477 PRCCQ92733 491 aaPredicted RBP19.72■□□□□ 0.75
SYNE4-202ENST00000340477 MRGPRX1Q96LB2 322 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 CCDC42Q96M95 316 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 FEM1AQ9BSK4 669 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 RAB6CQ9H0N0 254 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 VPS13AQ96RL7 3174 aa19.72■□□□□ 0.75
SYNE4-202ENST00000340477 DMDP11532 3685 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 PRPSAP2O60256 369 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 RNASEH1O60930 286 aaKnown RBP19.71■□□□□ 0.75
SYNE4-202ENST00000340477 RETP07949 1114 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 MZF1P28698 734 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-202ENST00000340477 ETFBP38117 255 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 P2RY2P41231 377 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 OGDHQ02218 1023 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 GFPT1Q06210 699 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-202ENST00000340477 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-202ENST00000340477 CAMK2GQ13555 558 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-202ENST00000340477 SLC36A4Q6YBV0 504 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 KBTBD6Q86V97 674 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 FAM160A2Q8N612 972 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-202ENST00000340477 ZNF366Q8N895 744 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 SIPA1Q96FS4 1042 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 MRFAP1L1Q96HT8 127 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 LOXL4Q96JB6 756 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 THAP2Q9H0W7 228 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 INVSQ9Y283 1065 aa19.71■□□□□ 0.75
SYNE4-202ENST00000340477 NYNRINQ9P2P1 1898 aaKnown RBP19.71■□□□□ 0.75
SYNE4-202ENST00000340477 EDDM13A0A1B0GTR0 161 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 EIF3CLB5ME19 914 aaKnown RBP19.7■□□□□ 0.74
SYNE4-202ENST00000340477 RHOQP17081 205 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 L1CAMP32004 1257 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 MAPKAPK2P49137 400 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 ZNF75DP51815 510 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 ACAP1Q15027 740 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 HNRNPA1L2Q32P51 320 aaKnown RBP19.7■□□□□ 0.74
SYNE4-202ENST00000340477 PLK5Q496M5 336 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 TTC31Q49AM3 519 aaPredicted RBP19.7■□□□□ 0.74
SYNE4-202ENST00000340477 LPCAT2Q7L5N7 544 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 TMPRSS6Q8IU80 811 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 GPR161Q8N6U8 529 aaKnown RBP19.7■□□□□ 0.74
SYNE4-202ENST00000340477 RLN3Q8WXF3 142 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 ZC3H10Q96K80 434 aaKnown RBP19.7■□□□□ 0.74
SYNE4-202ENST00000340477 EIF3CQ99613 913 aaKnown RBP19.7■□□□□ 0.74
SYNE4-202ENST00000340477 NUP85Q9BW27 656 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 CD248Q9HCU0 757 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 DONSONQ9NYP3 566 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 ANAPC7Q9UJX3 599 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 FZD10Q9ULW2 581 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 CYP8B1Q9UNU6 501 aa19.7■□□□□ 0.74
SYNE4-202ENST00000340477 ILVBLA1L0T0 632 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 TARSL2A2RTX5 802 aaKnown RBP19.69■□□□□ 0.74
SYNE4-202ENST00000340477 DCLK1O15075 740 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 CREB3O43889 395 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 LRIG2O94898 1065 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 CYP1A2P05177 515 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 HTR7P34969 479 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 CTSOP43234 321 aaPredicted RBP19.69■□□□□ 0.74
SYNE4-202ENST00000340477 SFSWAPQ12872 951 aaKnown RBP19.69■□□□□ 0.74
SYNE4-202ENST00000340477 PIGHQ14442 188 aaPredicted RBP19.69■□□□□ 0.74
SYNE4-202ENST00000340477 MANEALQ5VSG8 457 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 ZNF776Q68DI1 518 aaPredicted RBP19.69■□□□□ 0.74
SYNE4-202ENST00000340477 CACUL1Q86Y37 369 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 DCAF4L2Q8NA75 395 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 RPL10LQ96L21 214 aaKnown RBP19.69■□□□□ 0.74
SYNE4-202ENST00000340477 MRGPRX3Q96LB0 322 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 CATSPERBQ9H7T0 1116 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 NHEJ1Q9H9Q4 299 aaPredicted RBP19.69■□□□□ 0.74
SYNE4-202ENST00000340477 IP6K2Q9UHH9 426 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 LCMT1Q9UIC8 334 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 AP4E1Q9UPM8 1137 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 THADAQ6YHU6 1953 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 FAM186AA6NE01 2351 aa19.69■□□□□ 0.74
SYNE4-202ENST00000340477 RIF1Q5UIP0 2472 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms