RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ARID3BQ8IVW6 561 aaPredicted RBP10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 NUP93Q8N1F7 819 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 GPATCH11Q8N954 259 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 SLC44A1Q8WWI5 657 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 SIGLEC10Q96LC7 697 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 SLC39A8Q9C0K1 460 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 CYP4F11Q9HBI6 524 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 ABCC13Q9NSE7 274 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 MARCH2Q9P0N8 246 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 ZMYND8Q9ULU4 1186 aaPredicted RBP10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 PHGDHO43175 533 aaKnown RBP10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 IRAK2O43187 625 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 LYPLA1O75608 230 aaPredicted RBP10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 PRKCGP05129 697 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 POLBP06746 335 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 ACRP10323 421 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 CCNB1P14635 433 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 FDFT1P37268 417 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 KCNQ1P51787 676 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 ADGRD1Q6QNK2 874 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 ZNF534Q76KX8 674 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 MRPL10Q7Z7H8 261 aaKnown RBP10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 SCD5Q86SK9 330 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 OR6P1Q8NGX9 317 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 RFWD2Q8NHY2 731 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 C11orf84Q9BUA3 381 aaPredicted RBP10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 CRISPLD1Q9H336 500 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 ARMCX1Q9P291 453 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 ARL2BPQ9Y2Y0 163 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 ZNF638Q14966 1978 aaKnown RBP10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 C5orf60A6NFR6 353 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 ENPP3O14638 875 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 GJB3O75712 270 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 CABYRO75952 493 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 ASMTLO95671 621 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 GARSP41250 739 aaKnown RBP10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 CTBP1Q13363 440 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 PLD1Q13393 1074 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 ZNF460Q14592 562 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 CD300LGQ6UXG3 332 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 OTOAQ7RTW8 1153 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 CCDC91Q7Z6B0 441 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 LDB1Q86U70 411 aaPredicted RBP10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 TACO1Q9BSH4 297 aaKnown RBP10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 BRD8Q9H0E9 1235 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 HAO1Q9UJM8 370 aa10.4□□□□□ -0.75
RBFOX1-202ENST00000340209 E9PAM4 449 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 DCLK1O15075 740 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 VAPBO95292 243 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 SERPINB4P48594 390 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 TLE2Q04725 743 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 BFSP2Q13515 415 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 DPYSQ14117 519 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 CCSAPQ6IQ19 270 aaPredicted RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 RSPO2Q6UXX9 243 aaPredicted RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 RYBPQ8N488 228 aaPredicted RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 CYP2S1Q96SQ9 504 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 FBXO6Q9NRD1 293 aaPredicted RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 RGS18Q9NS28 235 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 USP3Q9Y6I4 520 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 ALDH3A1P30838 453 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 PAPOLAP51003 745 aaKnown RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 MXRA7P84157 204 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 ALFQ53S48 1182 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 N4BP2L1Q5TBK1 243 aaPredicted RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 MTDHQ86UE4 582 aaKnown RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 COLGALT2Q8IYK4 626 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 DIS3LQ8TF46 1054 aaKnown RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 CENPTQ96BT3 561 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 APOPT1Q96IL0 206 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 SENP1Q9P0U3 644 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 IPO11Q9UI26 975 aaKnown RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 PCDHB8Q9UN66 801 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 HS3ST4Q9Y661 456 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 MOXD2PA6NHM9 499 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 J3KR12 359 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 TLR5O60602 858 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 DGKIO75912 1065 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 NMBRP28336 390 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 KCNJ2P63252 427 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 NFE2Q16621 373 aaPredicted RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 PARP6Q2NL67 630 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 TRIM71Q2Q1W2 868 aaKnown RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 LHX8Q68G74 356 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 ITPRIPL1Q6GPH6 555 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 DCLK2Q8N568 766 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 FITM2Q8N6M3 262 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 ST13P5Q8NFI4 369 aaPredicted RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 OXNAD1Q96HP4 312 aaPredicted RBP10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 GKN1Q9NS71 199 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 PCDHA11Q9Y5I1 949 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 C5orf42Q9H799 3197 aa10.39□□□□□ -0.75
RBFOX1-202ENST00000340209 FAM237BA0A1B0GVD1 139 aa10.38□□□□□ -0.75
RBFOX1-202ENST00000340209 ARHGEF37A1IGU5 675 aa10.38□□□□□ -0.75
RBFOX1-202ENST00000340209 TCTN1Q2MV58 587 aa10.38□□□□□ -0.75
RBFOX1-202ENST00000340209 TRIM60Q495X7 471 aa10.38□□□□□ -0.75
RBFOX1-202ENST00000340209 ZNF598Q86UK7 904 aaKnown RBP10.38□□□□□ -0.75
RBFOX1-202ENST00000340209 PSTKQ8IV42 348 aaKnown RBP10.38□□□□□ -0.75
RBFOX1-202ENST00000340209 FCRL3Q96P31 734 aaPredicted RBP10.38□□□□□ -0.75
RBFOX1-202ENST00000340209 LRRC37BQ96QE4 947 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms