RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ARMC8Q8IUR7 673 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 CCDC103Q8IW40 242 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC22A15Q8IZD6 547 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 EID3Q8N140 333 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 PIK3R3Q92569 461 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 C1orf74Q96LT6 269 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 C2orf40Q9H1Z8 148 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC35C2Q9NQQ7 365 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 ACSS2Q9NR19 701 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 CHST12Q9NRB3 414 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 DUS2Q9NX74 493 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 WARS2Q9UGM6 360 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 POLIQ9UNA4 740 aa9.86□□□□□ -0.83
PTCHD4-201ENST00000339488 FAM149AA5PLN7 773 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF701M0R085 212 aaPredicted RBP9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ADSSP30520 456 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 GPC5P78333 572 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC10A2Q12908 348 aaPredicted RBP9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 COL19A1Q14993 1142 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 EML3Q32P44 896 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 PLA2G4EQ3MJ16 856 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 CEP55Q53EZ4 464 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 CATSPEREQ5SY80 951 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SHEQ5VZ18 495 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 PPP4R4Q6NUP7 873 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 FAM122CQ6P4D5 195 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 IDO2Q6ZQW0 420 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 DGLUCYQ7Z3D6 616 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 NEK8Q86SG6 692 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 EPS8L1Q8TE68 723 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC16A10Q8TF71 515 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC35C1Q96A29 364 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 PPWD1Q96BP3 646 aaKnown RBP9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SDCCAG3Q96C92 435 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SYT11Q9BT88 431 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 KATNAL1Q9BW62 490 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 OR2B2Q9GZK3 357 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 HMG20AQ9NP66 347 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 IGSF5Q9NSI5 407 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 TMEM260Q9NX78 707 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 MTRRQ9UBK8 725 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC24A2Q9UI40 661 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ENPP5Q9UJA9 477 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 FZD1Q9UP38 647 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 APOBEC2Q9Y235 224 aaKnown RBP9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 RGPD2P0DJD1 1756 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 A0A0B4J203 849 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 E2F8A0AVK6 867 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 TRIM49D1C9J1S8 452 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 RAD51BO15315 384 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC37A4O43826 429 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 TDP2O95551 362 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 CCDC159P0C7I6 412 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 GMPRP36959 345 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 PIGFQ07326 219 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 CDK10Q15131 360 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 FIP1L1Q6UN15 594 aaKnown RBP9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ARCQ7LC44 396 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 POC5Q8NA72 575 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF420Q8TAQ5 688 aaPredicted RBP9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SLCO2A1Q92959 643 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 KAT5Q92993 513 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SLC10A4Q96EP9 437 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 AGPAT1Q99943 283 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 BEX2Q9BXY8 128 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ALOXE3Q9BYJ1 711 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 DNAI2Q9GZS0 605 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 AKIP1Q9NQ31 210 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 RPRD1BQ9NQG5 326 aaKnown RBP9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF277Q9NRM2 450 aaPredicted RBP9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 CNNM1Q9NRU3 951 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 MOCS1Q9NZB8 636 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ITGA11Q9UKX5 1188 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 RIMKLBQ9ULI2 386 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 HCN4Q9Y3Q4 1203 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 CNTNAP2Q9UHC6 1331 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 F5H6K3 240 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 TPST1O60507 370 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 BMP3P12645 472 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ALAS2P22557 587 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 KLRC2P26717 231 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 HCAR3P49019 387 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 FCHO2Q0JRZ9 810 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 DBPQ10586 325 aaPredicted RBP9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SNX17Q15036 470 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 CBWD6Q4V339 395 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 CBWD3Q5JTY5 395 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 CBWD5Q5RIA9 395 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ADGRD1Q6QNK2 874 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SLCO6A1Q86UG4 719 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ZNF34Q8IZ26 560 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 SYNE4Q8N205 404 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 TERB1Q8NA31 727 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 FBXO36Q8NEA4 188 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 CDC26Q8NHZ8 85 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 ACSF2Q96CM8 615 aaPredicted RBP9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 NLRP4Q96MN2 994 aa9.85□□□□□ -0.83
PTCHD4-201ENST00000339488 LENG8Q96PV6 779 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms