RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 SPATA31D4Q6ZUB0 917 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 SH2D5Q6ZV89 423 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 TCP10LQ8TDR4 215 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 HDAC11Q96DB2 347 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 HAPLN3Q96S86 360 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 SMC6Q96SB8 1091 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 CLSTN3Q9BQT9 956 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 BEGAINQ9BUH8 593 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 KDM4CQ9H3R0 1056 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 ACTL7AQ9Y615 435 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 FNDC1Q4ZHG4 1894 aaPredicted RBP7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 ARHGEF37A1IGU5 675 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TRIM43BA6NCK2 446 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TRIM49D1C9J1S8 452 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 J3KR12 359 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 SMAPO00193 183 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 ATP9BO43861 1147 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 GJB5O95377 273 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 INHBAP08476 426 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 COL6A1P12109 1028 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TAC1P20366 129 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 DNAJB2P25686 324 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 ATP5DP30049 168 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TBX4P57082 545 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 IHHQ14623 411 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 MS4A13Q5J8X5 152 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 RAP1GAP2Q684P5 730 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 CGB2Q6NT52 195 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 RFWD3Q6PCD5 774 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 LVRNQ6Q4G3 990 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 LRRC6Q86X45 466 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 CFAP52Q8N1V2 620 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 CKAP2Q8WWK9 683 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 AZIN2Q96A70 460 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TRIM43Q96BQ3 446 aaPredicted RBP7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 MFSD3Q96ES6 412 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TGS1Q96RS0 853 aaKnown RBP7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC13A1Q9BZW2 595 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 FAM117AQ9C073 453 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 PRDM5Q9NQX1 630 aaPredicted RBP7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 CHRAC1Q9NRG0 131 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 IL37Q9NZH6 218 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TBX21Q9UL17 535 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 RRP15Q9Y3B9 282 aaKnown RBP7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 MYO16Q9Y6X6 1858 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC12A8A0AV02 714 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 ARHGAP42A6NI28 874 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 SDR42E2A6NKP2 422 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 CAPN15O75808 1086 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 CCNB1P14635 433 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 ATP2A2P16615 1042 aaKnown RBP7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 PAPOLAP51003 745 aaKnown RBP7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 MAXP61244 160 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 KLHL38Q2WGJ6 581 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 SPOUT1Q5T280 376 aaKnown RBP7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 KCTD11Q693B1 232 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 FBXL22Q6P050 247 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 LRRC8BQ6P9F7 803 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 SRLQ86TD4 932 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF683Q8IZ20 524 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 RIBC1Q8N443 379 aaPredicted RBP7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF276Q8N554 614 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 PTPRN2Q92932 1015 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 WBP2Q969T9 261 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 STAMBPL1Q96FJ0 436 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 ATXN7L3BQ96GX2 97 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 IGSF21Q96ID5 467 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TEKT5Q96M29 485 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 KLHL5Q96PQ7 755 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 AGAP2Q99490 1192 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 PHACTR1Q9C0D0 580 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 FBXO44Q9H4M3 255 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 GKN1Q9NS71 199 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 MOCS1Q9NZB8 636 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 MARCH2Q9P0N8 246 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 IGSF9Q9P2J2 1179 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TLR6Q9Y2C9 796 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 DOCK6Q96HP0 2047 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 FAM92AA1XBS5 289 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 OR6C75A6NL08 312 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TLR5O60602 858 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 PAX3P23760 479 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 PRKCHP24723 683 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 FDFT1P37268 417 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 IKBKEQ14164 716 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 PPP2R5DQ14738 602 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 BRMS1LQ5PSV4 323 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 NADSYN1Q6IA69 706 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 C6orf89Q6UWU4 347 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 BEND5Q7L4P6 421 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 OTOP2Q7RTS6 562 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 PIGWQ7Z7B1 504 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 DNAJC5GQ8N7S2 189 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 BANPQ8N9N5 519 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 DNAAF3Q8N9W5 541 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 TTC16Q8NEE8 873 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 OR52K2Q8NGK3 314 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 GSDMBQ8TAX9 411 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 APBB2Q92870 758 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms