RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SCUBE3Q8IX30 993 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 TRIM62Q9BVG3 475 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 GDF3Q9NR23 364 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 TJP2Q9UDY2 1190 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 SLCO3A1Q9UIG8 710 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 PCDHGA10Q9Y5H3 936 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 ITIH6Q6UXX5 1313 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 ENC1O14682 589 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 CAPN9O14815 690 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 YKT6O15498 198 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 GOT1P17174 413 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 HNF1BP35680 557 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 ARRB1P49407 418 aaPredicted RBP16.15■□□□□ 0.18
LINC01116-202ENST00000339037 ADPRHP54922 357 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 ELAVL3Q14576 367 aaKnown RBP16.15■□□□□ 0.18
LINC01116-202ENST00000339037 ISM2Q6H9L7 571 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 SND1Q7KZF4 910 aaKnown RBP eCLIP16.15■□□□□ 0.18
LINC01116-202ENST00000339037 RRAGAQ7L523 313 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 TAC4Q86UU9 113 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 CHSY1Q86X52 802 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 LGI2Q8N0V4 545 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 AADATQ8N5Z0 425 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 OR14C36Q8NHC7 312 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 SAP25Q8TEE9 199 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 NXPE2Q96DL1 559 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 SERAC1Q96JX3 654 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 CNDP2Q96KP4 475 aaKnown RBP16.15■□□□□ 0.18
LINC01116-202ENST00000339037 RPL10LQ96L21 214 aaKnown RBP16.15■□□□□ 0.18
LINC01116-202ENST00000339037 CEP63Q96MT8 703 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 TIGD1Q96MW7 591 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 EPAS1Q99814 870 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 XPO7Q9UIA9 1087 aaKnown RBP16.15■□□□□ 0.18
LINC01116-202ENST00000339037 TPX2Q9ULW0 747 aaKnown RBP16.15■□□□□ 0.18
LINC01116-202ENST00000339037 MGAQ8IWI9 3026 aa16.15■□□□□ 0.18
LINC01116-202ENST00000339037 PLXNA2O75051 1894 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 C10orf142B7Z368 130 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 PLK4O00444 970 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 P4HA2O15460 535 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 RFPL3O75679 317 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 LDOC1O95751 146 aaPredicted RBP16.14■□□□□ 0.17
LINC01116-202ENST00000339037 IL1BP01584 269 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 CDK4P11802 303 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 C5AR1P21730 350 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 MZF1P28698 734 aaPredicted RBP16.14■□□□□ 0.17
LINC01116-202ENST00000339037 EPHA8P29322 1005 aaPredicted RBP16.14■□□□□ 0.17
LINC01116-202ENST00000339037 NNMTP40261 264 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 GPD2P43304 727 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 ACADSBP45954 432 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 RPL34P49207 117 aaKnown RBP16.14■□□□□ 0.17
LINC01116-202ENST00000339037 DNAJC3Q13217 504 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 SHBQ15464 509 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 SYPL2Q5VXT5 272 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 RAP1GAP2Q684P5 730 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 BEND5Q7L4P6 421 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 APCDD1Q8J025 514 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 STK40Q8N2I9 435 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 LMO3Q8TAP4 145 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 BTN2A3PQ96KV6 586 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 BBC3Q96PG8 261 aaPredicted RBP16.14■□□□□ 0.17
LINC01116-202ENST00000339037 FAM129BQ96TA1 746 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 HOOK1Q9UJC3 728 aaKnown RBP16.14■□□□□ 0.17
LINC01116-202ENST00000339037 COL5A1P20908 1838 aaPredicted RBP16.14■□□□□ 0.17
LINC01116-202ENST00000339037 ATMQ13315 3056 aa16.14■□□□□ 0.17
LINC01116-202ENST00000339037 A0A1W2PR77 199 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 EIF4E1BA6NMX2 242 aaKnown RBP16.13■□□□□ 0.17
LINC01116-202ENST00000339037 CBX4O00257 560 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 WNT9AO14904 365 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 LATO43561 262 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 C1SP09871 688 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 KRT5P13647 590 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 JUPP14923 745 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 FECHP22830 423 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 STK19P49842 368 aaPredicted RBP16.13■□□□□ 0.17
LINC01116-202ENST00000339037 NXPH1P58417 271 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 SLC45A4Q5BKX6 768 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 ZC3H12AQ5D1E8 599 aaKnown RBP16.13■□□□□ 0.17
LINC01116-202ENST00000339037 C6orf118Q5T5N4 469 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 ARHGEF19Q8IW93 802 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 EID2Q8N6I1 236 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 PTPRN2Q92932 1015 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 DHTKD1Q96HY7 919 aaPredicted RBP16.13■□□□□ 0.17
LINC01116-202ENST00000339037 MAN1B1Q9UKM7 699 aa16.13■□□□□ 0.17
LINC01116-202ENST00000339037 TBC1D3DA0A087WVF3 549 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 TBC1D3IA0A087WXS9 549 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 TBC1D3EA0A087X179 549 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 TBC1D3KA0A087X1G2 549 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 TBC1D3FA6NER0 549 aaPredicted RBP16.12■□□□□ 0.17
LINC01116-202ENST00000339037 TBC1D3LB9A6J9 549 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 F5H5T6 163 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 TLR4O00206 839 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 TBC1D3HP0C7X1 549 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 TACR2P21452 398 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 ABCG1P45844 678 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 ACADVLP49748 655 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 NUMBP49757 651 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 CLDN6P56747 220 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 PPP2CBP62714 309 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 PPP2CAP67775 309 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 SULT2A1Q06520 285 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 SLC12A1Q13621 1099 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms