RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 UNQ6494/PRO21346Q6UXR6 183 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 NOP9Q86U38 636 aaKnown RBP13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 MARCH9Q86YJ5 346 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 NAXDQ8IW45 347 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 CPA5Q8WXQ8 436 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 RPRD1AQ96P16 312 aaPredicted RBP13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 NPY6RQ99463 290 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 MAGEB5Q9BZ81 275 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 PDCL3Q9H2J4 239 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 SYNCQ9H7C4 482 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 SGK2Q9HBY8 427 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 TM7SF3Q9NS93 570 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 ASNSD1Q9NWL6 643 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 SARDHQ9UL12 918 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 NCKAP1Q9Y2A7 1128 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 ANKRD6Q9Y2G4 727 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 NFE2L3Q9Y4A8 694 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 PCDHB9Q9Y5E1 797 aa13.78□□□□□ -0.2
NUDCD3-201ENST00000338427 TARSL2A2RTX5 802 aaKnown RBP13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 GOLGA8CPA6NN73 597 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 GOLGA8SH3BPF8 625 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 RNF103O00237 685 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 CBFA2T3O75081 653 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 MOCS3O95396 460 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 MT-CO1P00395 513 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 WNT1P04628 370 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 MMEP08473 750 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 CD27P26842 260 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 MATKP42679 507 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 IL9RQ01113 521 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 ZBTB16Q05516 673 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 SLC14A1Q13336 389 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 ACCSLQ4AC99 568 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 TCP11X2Q5H9J9 407 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 ARTNQ5T4W7 220 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 RNF219Q5W0B1 726 aaPredicted RBP13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 KIAA0895LQ68EN5 471 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 GPT2Q8TD30 523 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 FRS2Q8WU20 508 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 SLC20A1Q8WUM9 679 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 GATA6Q92908 595 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 SLC6A18Q96N87 628 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 TBCBQ99426 244 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 OMDQ99983 421 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 FEM1AQ9BSK4 669 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 TRIM62Q9BVG3 475 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 ZDHHC5Q9C0B5 715 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 TKTL2Q9H0I9 626 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 ZMIZ1Q9ULJ6 1067 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 OR51B4Q9Y5P0 310 aa13.77□□□□□ -0.21
NUDCD3-201ENST00000338427 CABIN1Q9Y6J0 2220 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 EDDM13A0A1B0GTR0 161 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 H0Y8X5 98 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 K7ERQ8 282 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 EPHB6O15197 1021 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 BNIP3LO60238 219 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 SNAP91O60641 907 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 RNASEH1O60930 286 aaKnown RBP13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 DAB1O75553 588 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 GJB6O95452 261 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 IL1BP01584 269 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 ATXN1LP0C7T5 689 aaKnown RBP13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 UCHL3P15374 230 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 CHRNB2P17787 502 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 CXCR3P49682 368 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 SULT1E1P49888 294 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 PLK1P53350 603 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 ZNF177Q13360 481 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 ARID5BQ14865 1188 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 DLG2Q15700 870 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 TTC31Q49AM3 519 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 SLC26A9Q7LBE3 791 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 ERICH1Q86X53 443 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 XYLT1Q86Y38 959 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 FAM114A1Q8IWE2 563 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 ZNF557Q8N988 423 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 TMEM35BQ8NCS4 154 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 ZNF397Q8NF99 534 aaPredicted RBP13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 OR14C36Q8NHC7 312 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 RHBDD1Q8TEB9 315 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 C18orf8Q96DM3 657 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 NOX5Q96PH1 765 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 WDCPQ9H6R7 721 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 CAAP1Q9H8G2 361 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 FBRSQ9HAH7 460 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 MPP6Q9NZW5 540 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 PCOLCE2Q9UKZ9 415 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 DOCK9Q9BZ29 2069 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 TMEM131Q92545 1883 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 CEP295Q9C0D2 2601 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 USP24Q9UPU5 2620 aa13.76□□□□□ -0.21
NUDCD3-201ENST00000338427 ITIH6Q6UXX5 1313 aa13.75□□□□□ -0.21
NUDCD3-201ENST00000338427 A0A1B0GVM2 712 aa13.75□□□□□ -0.21
NUDCD3-201ENST00000338427 TCAF2A6NFQ2 919 aa13.75□□□□□ -0.21
NUDCD3-201ENST00000338427 RTN2O75298 545 aa13.75□□□□□ -0.21
NUDCD3-201ENST00000338427 GFPT2O94808 682 aa13.75□□□□□ -0.21
NUDCD3-201ENST00000338427 FTH1P19P0C7X4 201 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms