RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 HARS2P49590 506 aaKnown RBP15.85■□□□□ 0.13
LIMS1-202ENST00000338045 ZBTB17Q13105 803 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 ZNF534Q76KX8 674 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 PID1Q7Z2X4 250 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 CAND1Q86VP6 1230 aaKnown RBP15.85■□□□□ 0.13
LIMS1-202ENST00000338045 KREMEN2Q8NCW0 462 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 PGM2Q96G03 612 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 C17orf80Q9BSJ5 609 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 LRRC3Q9BY71 257 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 CEP41Q9BYV8 373 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 RETREG1Q9H6L5 497 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 TLR9Q9NR96 1032 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 TEX264Q9Y6I9 313 aa15.85■□□□□ 0.13
LIMS1-202ENST00000338045 DFFAO00273 331 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 CNTN5O94779 1100 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 ARHGEF15O94989 841 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 RB1P06400 928 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 C8AP07357 584 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 TSHRP16473 764 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 SLC11A2P49281 568 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 FAM133BQ5BKY9 247 aaKnown RBP15.84■□□□□ 0.13
LIMS1-202ENST00000338045 SYCP2LQ5T4T6 812 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 CHSY1Q86X52 802 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 TMC8Q8IU68 726 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 ATPAF2Q8N5M1 289 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 PYROXD1Q8WU10 500 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 FATE1Q969F0 183 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 TEKT5Q96M29 485 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 KLHL8Q9P2G9 620 aaPredicted RBP15.84■□□□□ 0.13
LIMS1-202ENST00000338045 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.84■□□□□ 0.13
LIMS1-202ENST00000338045 A0A087WUV0 522 aaPredicted RBP15.84■□□□□ 0.13
LIMS1-202ENST00000338045 GOLGA6L7A0A1B0GV03 622 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 RASGRF2O14827 1237 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 GLUD1P00367 558 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 C1RP00736 705 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 LRG1P02750 347 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 KLKB1P03952 638 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 PSMB4P28070 264 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 CD68P34810 354 aaPredicted RBP15.84■□□□□ 0.13
LIMS1-202ENST00000338045 GPX6P59796 221 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 IFI35P80217 286 aaPredicted RBP15.84■□□□□ 0.13
LIMS1-202ENST00000338045 STAT4Q14765 748 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 BBS9Q3SYG4 887 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 CCDC38Q502W7 563 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 TNFAIP8L3Q5GJ75 292 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 HP1BP3Q5SSJ5 553 aaPredicted RBP15.84■□□□□ 0.13
LIMS1-202ENST00000338045 C6orf118Q5T5N4 469 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 PLPP4Q5VZY2 271 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 ARHGAP36Q6ZRI8 547 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 RTL10Q7L3V2 364 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 AGGF1Q8N302 714 aaeCLIP15.84■□□□□ 0.13
LIMS1-202ENST00000338045 MYEOVQ96EZ4 313 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 ZFRQ96KR1 1074 aaKnown RBP15.84■□□□□ 0.13
LIMS1-202ENST00000338045 RPRD1AQ96P16 312 aaPredicted RBP15.84■□□□□ 0.13
LIMS1-202ENST00000338045 IL12RB2Q99665 862 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 GBA3Q9H227 469 aa15.84■□□□□ 0.13
LIMS1-202ENST00000338045 E7EVH7 732 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 F5H5T6 163 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 MATN3O15232 486 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 ZBTB24O43167 697 aaPredicted RBP15.83■□□□□ 0.12
LIMS1-202ENST00000338045 CACNG3O60359 315 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 MLNP12872 115 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 SLC6A4P31645 630 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 MAPKAPK2P49137 400 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 PAPOLAP51003 745 aaKnown RBP15.83■□□□□ 0.12
LIMS1-202ENST00000338045 CLCN4P51793 760 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 CAMK1Q14012 370 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 EMC10Q5UCC4 262 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 KCTD16Q68DU8 428 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 TIGD7Q6NT04 549 aaPredicted RBP15.83■□□□□ 0.12
LIMS1-202ENST00000338045 GAREM2Q75VX8 874 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 TFAP2DQ7Z6R9 452 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 ANKMY2Q8IV38 441 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 KLHDC8BQ8IXV7 354 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 ATP11CQ8NB49 1132 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 FBXO36Q8NEA4 188 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 EPS8L3Q8TE67 593 aaKnown RBP15.83■□□□□ 0.12
LIMS1-202ENST00000338045 LRRC39Q96DD0 335 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 GORASP1Q9BQQ3 440 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 XAB2Q9HCS7 855 aaKnown RBP15.83■□□□□ 0.12
LIMS1-202ENST00000338045 GKN1Q9NS71 199 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 OBSL1O75147 1896 aa15.83■□□□□ 0.12
LIMS1-202ENST00000338045 AVILO75366 819 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 CCNB1P14635 433 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 MYOGP15173 224 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 CORO1AP31146 461 aaKnown RBP15.82■□□□□ 0.12
LIMS1-202ENST00000338045 GYS2P54840 703 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 SARNPP82979 210 aaKnown RBP15.82■□□□□ 0.12
LIMS1-202ENST00000338045 C9orf50Q5SZB4 431 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 ITPRIPL1Q6GPH6 555 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 SPRED2Q7Z698 418 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 IGDCC3Q8IVU1 814 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 SH2D3CQ8N5H7 860 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 CNTD1Q8N815 330 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 PDCD7Q8N8D1 485 aaKnown RBP15.82■□□□□ 0.12
LIMS1-202ENST00000338045 FAM76AQ8TAV0 307 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 MAML1Q92585 1016 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 TLCD1Q96CP7 247 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 STOML2Q9UJZ1 356 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 ADAM21Q9UKJ8 722 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms